About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10985_0.4
PE_Scaf10987_0.0
PE_Scaf10993_0.0PROTEIN FAM204A
PE_Scaf10993_0.5BNIP1-RELATED
PE_Scaf10993_1.13BETA/GAMMA CRYSTALLIN
PE_Scaf10993_1.7
PE_Scaf10993_1.9
PE_Scaf10993_2.3BETA/GAMMA CRYSTALLIN
PE_Scaf10994_0.0
PE_Scaf10994_0.1
PE_Scaf10998_0.0
PE_Scaf109_0.4SPHINGOMYELINASE FAMILY MEMBER
PE_Scaf109_0.7PEFLIN
PE_Scaf10_0.0
PE_Scaf10_0.6GLYCINE N-METHYLTRANSFERASE
PE_Scaf10_1.4TYROSINASE FAMILY MEMBER
PE_Scaf10_1.5
PE_Scaf11003_0.0
PE_Scaf11003_0.1
PE_Scaf11003_1.11ZINC FINGER AND SCAN DOMAIN-CONTAINING
PE_Scaf11003_1.12ZINC FINGER PROTEIN
PE_Scaf11003_1.52
PE_Scaf11005_0.0CCHC-TYPE DOMAIN-CONTAINING PROTEIN
PE_Scaf11007_0.0
PE_Scaf11007_0.6
PE_Scaf11008_0.5ZINC FINGER RNA-BINDING PROTEIN
PE_Scaf11009_0.3GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
PE_Scaf11010_0.3PROTEIN CBG12474
PE_Scaf11011_0.4
PE_Scaf11013_0.0
PE_Scaf11013_1.5
PE_Scaf11013_1.7
PE_Scaf11014_0.3KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
PE_Scaf11015_0.1
PE_Scaf11016_0.3PROHIBITIN
PE_Scaf11016_1.0
PE_Scaf11016_1.4LUPUS LA PROTEIN-RELATED
PE_Scaf11016_1.5MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
PE_Scaf11016_2.2DNA TOPOISOMERASE/GYRASE
PE_Scaf11016_3.3ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4
PE_Scaf11016_4.11LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
PE_Scaf11016_4.7CELL DIVISION CYCLE 16,23,27
PE_Scaf11016_4.9COILED-COIL DOMAIN-CONTAINING PROTEIN 103
PE_Scaf11019_0.0
PE_Scaf11019_0.1
PE_Scaf11019_0.2
PE_Scaf1101_0.0
PE_Scaf1101_0.5
PE_Scaf11020_0.3ADENOSINE KINASE
PE_Scaf11020_0.5MITOCHONDRIAL RIBOSOMAL PROTEIN L24
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