About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10825_2.8GH04942P
PE_Scaf10825_2.9PROTEIN CBG04600
PE_Scaf10826_0.0
PE_Scaf10827_1.6CHITINASE
PE_Scaf10827_1.7CHITINASE
PE_Scaf10829_1.22-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
PE_Scaf10829_1.32-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
PE_Scaf10829_2.0
PE_Scaf10829_2.5SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_3.1SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_3.7SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_6.16SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_6.4SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_6.5SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf10829_6.9SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf1082_0.6ARFAPTIN-RELATED
PE_Scaf1082_0.8-
PE_Scaf10830_0.0
PE_Scaf10830_0.5DELTA ADAPTIN-RELATED
PE_Scaf10831_0.3NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf10832_0.1LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf10833_0.3CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
PE_Scaf10833_1.13TRANSKETOLASE
PE_Scaf10833_1.4UNCHARACTERIZED
PE_Scaf10833_1.5DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
PE_Scaf10833_5.0
PE_Scaf10833_5.17PIERCE HOMOLOG
PE_Scaf10833_5.8SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PE_Scaf10836_0.3EXPRESSED PROTEIN
PE_Scaf10836_2.5
PE_Scaf10836_2.6
PE_Scaf10837_0.3PROTEIN CBG12054-RELATED
PE_Scaf10837_3.6PDF RECEPTOR-LIKE PROTEIN-RELATED
PE_Scaf10838_0.5EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
PE_Scaf10838_0.8DELTA ADAPTIN-RELATED
PE_Scaf10839_0.1
PE_Scaf10839_1.4
PE_Scaf10839_1.7PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
PE_Scaf10839_1.8SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2
PE_Scaf10839_2.7PROTEIN FAM220A
PE_Scaf10839_2.8
PE_Scaf10839_2.9ADIPOR/PROGESTIN RECEPTOR-RELATED
PE_Scaf10839_3.3METHYLTRANSFERASE, FKBM FAMILY PROTEIN
PE_Scaf10839_3.4ENDONUCLEASE III-LIKE PROTEIN 1
PE_Scaf10839_4.12
PE_Scaf10839_4.5RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
PE_Scaf10839_4.6
PE_Scaf10839_5.1
PE_Scaf10839_5.8ACROSIN-RELATED
PE_Scaf1083_0.0
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