Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00182510 | AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN |
| SKAU_T00182520 | UNCHARACTERIZED |
| SKAU_T00182530 | LP10445P |
| SKAU_T00182540 | MADF DOMAIN TRANSCRIPTION FACTOR |
| SKAU_T00182550 | |
| SKAU_T00182560 | NUCLEAR FACTOR RIP140 |
| SKAU_T00182570 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00182580 | |
| SKAU_T00182590 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| SKAU_T00182600 | SOLUTE CARRIER FAMILY 35 MEMBER B |
| SKAU_T00182610 | NF-KAPPA-B INHIBITOR ALPHA |
| SKAU_T00182620 | TRANSMEMBRANE PROTEIN 151 HOMOLOG |
| SKAU_T00182630 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
| SKAU_T00182640 | |
| SKAU_T00182650 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 |
| SKAU_T00182660 | NUCLEOSIDE DIPHOSPHATE KINASE 6 |
| SKAU_T00182670 | BRAIN AND ACUTE LEUKEMIA CYTOPLASMIC PROTEIN |
| SKAU_T00182680 | |
| SKAU_T00182690 | PROTEIN DISPATCHED-RELATED |
| SKAU_T00182700 | TGF-BETA FAMILY |
| SKAU_T00182710 | |
| SKAU_T00182720 | ZINC FINGER PROTEIN |
| SKAU_T00182730 | |
| SKAU_T00182740 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| SKAU_T00182750 | ZINC FINGER PROTEIN ZIC AND GLI |
| SKAU_T00182760 | |
| SKAU_T00182770 | |
| SKAU_T00182780 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| SKAU_T00182790 | |
| SKAU_T00182800 | DEOXYRIBONUCLEASE TATDN2-RELATED |
| SKAU_T00182810 | ZINC FINGER PROTEIN |
| SKAU_T00182820 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| SKAU_T00182830 | |
| SKAU_T00182840 | |
| SKAU_T00182850 | CYTOSOLIC CARBOXYPEPTIDASE |
| SKAU_T00182860 | TRANSMEMBRANE PROTEIN 214 |
| SKAU_T00182870 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| SKAU_T00182880 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| SKAU_T00182890 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| SKAU_T00182900 | |
| SKAU_T00182910 | |
| SKAU_T00182920 | DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED |
| SKAU_T00182930 | |
| SKAU_T00182940 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| SKAU_T00182950 | |
| SKAU_T00182960 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| SKAU_T00182970 | LD44762P |
| SKAU_T00182980 | L-THREONINE 3-DEHYDROGENASE |
| SKAU_T00182990 | MYOTUBULARIN-RELATED |
| SKAU_T00183000 |
