Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00179510 | RAP GTPASE-ACTIVATING PROTEIN |
| SKAU_T00179520 | CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE |
| SKAU_T00179530 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00179540 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00179550 | |
| SKAU_T00179560 | |
| SKAU_T00179570 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| SKAU_T00179580 | - |
| SKAU_T00179590 | PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN |
| SKAU_T00179600 | |
| SKAU_T00179610 | PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN |
| SKAU_T00179620 | RIBOSOMAL PROTEIN L2 |
| SKAU_T00179630 | KINESIN LIGHT CHAIN |
| SKAU_T00179640 | CONTACTIN 5 |
| SKAU_T00179650 | SERUM RESPONSE FACTOR HOMOLOG |
| SKAU_T00179660 | GUANYLATE BINDING PROTEIN |
| SKAU_T00179670 | UNCHARACTERIZED |
| SKAU_T00179680 | - |
| SKAU_T00179690 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00179700 | S-ADENOSYLMETHIONINE SYNTHETASE |
| SKAU_T00179710 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| SKAU_T00179720 | |
| SKAU_T00179730 | B-BOX DOMAIN CONTAINING |
| SKAU_T00179740 | ZINC FINGER PROTEIN |
| SKAU_T00179750 | |
| SKAU_T00179760 | |
| SKAU_T00179770 | WINGED HELIX DOMAIN-CONTAINING PROTEIN |
| SKAU_T00179780 | CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN |
| SKAU_T00179790 | IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED |
| SKAU_T00179800 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| SKAU_T00179810 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
| SKAU_T00179820 | UNCHARACTERIZED |
| SKAU_T00179830 | 40S RIBOSOMAL PROTEIN S24 |
| SKAU_T00179840 | GC-RICH SEQUENCE DNA-BINDING FACTOR |
| SKAU_T00179850 | SOLUTE CARRIER FAMILY 39 ZINC TRANSPORTER , MEMBER 9-RELATED |
| SKAU_T00179860 | PROBABLE MEMBRANE PROTEIN DUF221-RELATED |
| SKAU_T00179870 | 39S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL |
| SKAU_T00179880 | CALPAIN |
| SKAU_T00179890 | CALPAIN |
| SKAU_T00179900 | CALPAIN |
| SKAU_T00179910 | |
| SKAU_T00179920 | CALPAIN |
| SKAU_T00179930 | CALPAIN |
| SKAU_T00179940 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
| SKAU_T00179950 | COFILIN-RELATED |
| SKAU_T00179960 | RIBOSOME BINDING PROTEIN-1 |
| SKAU_T00179970 | |
| SKAU_T00179980 | |
| SKAU_T00179990 | SORTING NEXIN FAMILY MEMBER |
| SKAU_T00180000 | MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1 |
