About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf7628_0.1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
PE_Scaf7628_1.11PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
PE_Scaf762_0.3
PE_Scaf7630_0.1
PE_Scaf7630_0.11INHIBITOR OF APOPTOSIS
PE_Scaf7630_0.12
PE_Scaf7630_0.8
PE_Scaf7630_0.9
PE_Scaf7631_0.3
PE_Scaf7631_1.2
PE_Scaf7631_4.4
PE_Scaf7631_4.6
PE_Scaf7631_6.3
PE_Scaf7631_7.5
PE_Scaf7631_8.2
PE_Scaf7631_9.3
PE_Scaf7631_9.5
PE_Scaf7632_0.1
PE_Scaf7632_0.10S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
PE_Scaf7632_0.8
PE_Scaf7633_1.3TRANSCRIPTION INITIATION FACTOR TFIID
PE_Scaf7633_1.4U6 SNRNA-ASSOCIATED PROTEIN
PE_Scaf7634_0.2
PE_Scaf7635_0.1
PE_Scaf7638_1.3
PE_Scaf7638_3.2
PE_Scaf7642_0.21-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
PE_Scaf7643_0.2SI:CH211-262H13.3-RELATED-RELATED
PE_Scaf7644_0.1OVOCHYMASE-RELATED
PE_Scaf7644_0.3OVOCHYMASE-RELATED
PE_Scaf7645_1.0
PE_Scaf7645_1.1
PE_Scaf7645_10.0
PE_Scaf7645_10.6
PE_Scaf7645_2.1
PE_Scaf7645_2.12PIKACHURIN-LIKE PROTEIN
PE_Scaf7645_2.13PIKACHURIN-LIKE PROTEIN
PE_Scaf7645_2.15FOLLISTATIN-RELATED
PE_Scaf7645_2.2
PE_Scaf7645_5.4SCP160
PE_Scaf7645_6.7DULLARD PROTEIN PHOSPHATASE
PE_Scaf7645_6.8ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
PE_Scaf7645_7.5CLEAVAGE STIMULATION FACTOR SUBUNIT 1
PE_Scaf7645_7.6SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
PE_Scaf7645_8.2COPINE FAMILY PROTEIN 1
PE_Scaf7645_9.4DNA REPAIR/RNA PROCESSING CPSF FAMILY
PE_Scaf7646_0.0
PE_Scaf7649_0.3PLEXIN
PE_Scaf7649_0.5SET DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf7650_1.1
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