The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g4036 | |
| MBSQW58_g4037 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| MBSQW58_g4038 | |
| MBSQW58_g4039 | LORICRIN |
| MBSQW58_g404 | SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 |
| MBSQW58_g4040 | |
| MBSQW58_g4041 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| MBSQW58_g4042 | GLUTATHIONE S-TRANSFERASE |
| MBSQW58_g4043 | |
| MBSQW58_g4044 | L-ASPARTATE DEHYDROGENASE-RELATED |
| MBSQW58_g4045 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| MBSQW58_g4046 | PROTEIN SIDEKICK |
| MBSQW58_g4047 | PROTEIN SIDEKICK |
| MBSQW58_g4048 | |
| MBSQW58_g4049 | |
| MBSQW58_g405 | |
| MBSQW58_g4050 | CYCLINS |
| MBSQW58_g4051 | FACIOGENITAL DYSPLASIA PROTEIN |
| MBSQW58_g4052 | RHO FAMILY GTPASE |
| MBSQW58_g4053 | METALLOPROTEASE |
| MBSQW58_g4054 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| MBSQW58_g4055 | ENOS INTERACTING PROTEIN |
| MBSQW58_g4056 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| MBSQW58_g4057 | HOMEODOMAIN-ONLY PROTEIN |
| MBSQW58_g4058 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g4059 | PIKACHURIN-LIKE PROTEIN |
| MBSQW58_g406 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g4060 | |
| MBSQW58_g4061 | CADHERIN-23 |
| MBSQW58_g4062 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| MBSQW58_g4063 | MOLTING PROTEIN MLT-4 |
| MBSQW58_g4064 | |
| MBSQW58_g4065 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| MBSQW58_g4066 | CHONDROITIN SYNTHASE |
| MBSQW58_g4067 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| MBSQW58_g4068 | SUGAR KINASE |
| MBSQW58_g4069 | TUBULIN |
| MBSQW58_g407 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| MBSQW58_g4070 | |
| MBSQW58_g4071 | OVOCHYMASE-RELATED |
| MBSQW58_g4072 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| MBSQW58_g4073 | PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12 |
| MBSQW58_g4074 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| MBSQW58_g4075 | NADH DEHYDROGENASE |
| MBSQW58_g4076 | INNER MEMBRANE PROTEIN YEDE |
| MBSQW58_g4077 | CYTOSINE DEAMINASE FAMILY MEMBER |
| MBSQW58_g4078 | UNCHARACTERIZED |
| MBSQW58_g4079 | |
| MBSQW58_g408 | |
| MBSQW58_g4080 | UNCHARACTERIZED |
