The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g3811 | SHORT COILED COIL PROTEIN |
| MBSQW58_g3812 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g3813 | PROTEIN CBG26694 |
| MBSQW58_g3814 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g3815 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g3816 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| MBSQW58_g3817 | AMINO ACID TRANSPORTER |
| MBSQW58_g3818 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| MBSQW58_g3819 | PROTEIN FAM181B |
| MBSQW58_g382 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| MBSQW58_g3820 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| MBSQW58_g3821 | MITOCHONDRIA-EATING PROTEIN-RELATED |
| MBSQW58_g3822 | TETRA THYMOSIN |
| MBSQW58_g3823 | RAN BINDING PROTEIN 9-RELATED |
| MBSQW58_g3824 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g3825 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
| MBSQW58_g3826 | HSC70CB, ISOFORM G-RELATED |
| MBSQW58_g3827 | SERINE/THREONINE-PROTEIN KINASE PLK |
| MBSQW58_g3828 | |
| MBSQW58_g3829 | NOTCH LIGAND FAMILY MEMBER |
| MBSQW58_g383 | |
| MBSQW58_g3830 | |
| MBSQW58_g3831 | SERINE/THREONINE-PROTEIN KINASE PLK |
| MBSQW58_g3832 | NEPHRIN |
| MBSQW58_g3833 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g3834 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g3835 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| MBSQW58_g3836 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g3837 | |
| MBSQW58_g3838 | |
| MBSQW58_g3839 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g384 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| MBSQW58_g3840 | |
| MBSQW58_g3841 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| MBSQW58_g3842 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
| MBSQW58_g3843 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
| MBSQW58_g3844 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| MBSQW58_g3845 | MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 |
| MBSQW58_g3846 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
| MBSQW58_g3847 | |
| MBSQW58_g3848 | COILED-COIL DOMAIN-CONTAINING PROTEIN 169 |
| MBSQW58_g3849 | SOLUTE CARRIER FAMILY 17 |
| MBSQW58_g385 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
| MBSQW58_g3850 | ALZHEIMER'S DISEASE BETA-AMYLOID RELATED |
| MBSQW58_g3851 | SOLUTE CARRIER FAMILY 22 MEMBER |
| MBSQW58_g3852 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70 |
| MBSQW58_g3853 | NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52 |
| MBSQW58_g3854 | MONOCARBOXYLATE TRANSPORTER |
| MBSQW58_g3855 | MONOCARBOXYLATE TRANSPORTER |
| MBSQW58_g3856 | MONOCARBOXYLATE TRANSPORTER |
