Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00163010 | THROMBOSPONDIN |
| SKAU_T00163020 | |
| SKAU_T00163030 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
| SKAU_T00163040 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| SKAU_T00163050 | |
| SKAU_T00163060 | POTASSIUM CHANNEL, SUBFAMILY K |
| SKAU_T00163070 | UNCHARACTERIZED |
| SKAU_T00163080 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00163090 | RNA METHYLTRANSFERASE |
| SKAU_T00163100 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
| SKAU_T00163110 | |
| SKAU_T00163120 | DAPPER-RELATED |
| SKAU_T00163130 | |
| SKAU_T00163140 | |
| SKAU_T00163150 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
| SKAU_T00163160 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 |
| SKAU_T00163170 | FAT ATYPICAL CADHERIN-RELATED |
| SKAU_T00163180 | V-TYPE IMMUNOGLOBULIN DOMAIN-CONTAINING SUPPRESSOR OF T-CELL ACTIVATION |
| SKAU_T00163190 | LD44762P |
| SKAU_T00163200 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00163210 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00163220 | |
| SKAU_T00163230 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| SKAU_T00163240 | |
| SKAU_T00163250 | |
| SKAU_T00163260 | CDC42 EFFECTOR PROTEIN BORG |
| SKAU_T00163270 | |
| SKAU_T00163280 | OPSIN |
| SKAU_T00163290 | KYNURENINE 3-MONOOXYGENASE |
| SKAU_T00163300 | NARDILYSIN |
| SKAU_T00163310 | |
| SKAU_T00163320 | E3 UBIQUITIN-PROTEIN LIGASE MARCH5 |
| SKAU_T00163330 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
| SKAU_T00163340 | TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 |
| SKAU_T00163350 | TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 |
| SKAU_T00163360 | CYCLINS |
| SKAU_T00163370 | ZINC FINGER PROTEIN |
| SKAU_T00163380 | SH2 DOMAIN CONTAINING PROTEIN |
| SKAU_T00163390 | |
| SKAU_T00163400 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| SKAU_T00163410 | |
| SKAU_T00163420 | |
| SKAU_T00163430 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
| SKAU_T00163440 | N-ACYLNEURAMINATE-9-PHOSPHATASE |
| SKAU_T00163450 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| SKAU_T00163460 | TUBULIN--TYROSINE LIGASE |
| SKAU_T00163470 | ALPHA CATENIN |
| SKAU_T00163480 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| SKAU_T00163490 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00163500 | LUNG SEVEN TRANSMEMBRANE RECEPTOR |
