Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00164510 | HEXOKINASE |
| SKAU_T00164520 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |
| SKAU_T00164530 | TETRASPANIN |
| SKAU_T00164540 | RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN |
| SKAU_T00164550 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| SKAU_T00164560 | PHENAZINE BIOSYNTHESIS PROTEIN |
| SKAU_T00164570 | |
| SKAU_T00164580 | |
| SKAU_T00164590 | HL01030P-RELATED |
| SKAU_T00164600 | NOTCH LIGAND FAMILY MEMBER |
| SKAU_T00164610 | CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA |
| SKAU_T00164620 | |
| SKAU_T00164630 | METALLOPROTEASE TLDD |
| SKAU_T00164640 | TATA-BOX BINDING PROTEIN |
| SKAU_T00164650 | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED |
| SKAU_T00164660 | RHO FAMILY GTPASE |
| SKAU_T00164670 | UNCHARACTERIZED |
| SKAU_T00164680 | ACTIN |
| SKAU_T00164690 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| SKAU_T00164700 | UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG |
| SKAU_T00164710 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| SKAU_T00164720 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5 |
| SKAU_T00164730 | SERINE PROTEASE INHIBITOR, SERPIN |
| SKAU_T00164740 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00164750 | REGULATOR OF G PROTEIN SIGNALING |
| SKAU_T00164760 | |
| SKAU_T00164770 | |
| SKAU_T00164780 | IMMUNOGLOBULIN |
| SKAU_T00164790 | CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00164800 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00164810 | BEIGE/BEACH-RELATED |
| SKAU_T00164820 | BEIGE/BEACH-RELATED |
| SKAU_T00164830 | |
| SKAU_T00164840 | MITOFERRIN-1-RELATED |
| SKAU_T00164850 | HOMEOBOX PROTEIN NKX |
| SKAU_T00164860 | HOMEOBOX PROTEIN NKX |
| SKAU_T00164870 | UNCHARACTERIZED |
| SKAU_T00164880 | |
| SKAU_T00164890 | COLLAGEN ALPHA |
| SKAU_T00164900 | COLLAGEN |
| SKAU_T00164910 | SI:CH211-266K2.1 |
| SKAU_T00164920 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| SKAU_T00164930 | |
| SKAU_T00164940 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| SKAU_T00164950 | |
| SKAU_T00164960 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00164970 | |
| SKAU_T00164980 | |
| SKAU_T00164990 | CRUMBS FAMILY MEMBER |
| SKAU_T00165000 | CRUMBS FAMILY MEMBER |
