Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00161010 | MALE-ENHANCED ANTIGEN-1 |
| SKAU_T00161020 | 2'-DEOXYNUCLEOSIDE 5'-PHOSPHATE N-HYDROLASE 1 |
| SKAU_T00161030 | |
| SKAU_T00161040 | CRUMBS FAMILY MEMBER |
| SKAU_T00161050 | |
| SKAU_T00161060 | |
| SKAU_T00161070 | |
| SKAU_T00161080 | TIGHT JUNCTION-ASSOCIATED PROTEIN 1 |
| SKAU_T00161090 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
| SKAU_T00161100 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| SKAU_T00161110 | DNA-DIRECTED RNA POLYMERASE |
| SKAU_T00161120 | F-BOX ONLY PROTEIN 28 |
| SKAU_T00161130 | SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2 |
| SKAU_T00161140 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00161150 | |
| SKAU_T00161160 | AAA-FAMILY ATPASE |
| SKAU_T00161170 | ZINC FINGER CONTAINING PROTEIN |
| SKAU_T00161180 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
| SKAU_T00161190 | FAM98 |
| SKAU_T00161200 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00161210 | |
| SKAU_T00161220 | |
| SKAU_T00161230 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
| SKAU_T00161240 | UNCHARACTERIZED |
| SKAU_T00161250 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| SKAU_T00161260 | |
| SKAU_T00161270 | |
| SKAU_T00161280 | GOLGI MEMBRANE PROTEIN YIP1 |
| SKAU_T00161290 | FLAP ENDONUCLEASE FAMILY MEMBER |
| SKAU_T00161300 | PERIAXIN/AHNAK |
| SKAU_T00161310 | ECTODYSPLASIN-A RECEPTOR-ASSOCIATED ADAPTER PROTEIN |
| SKAU_T00161320 | PDZ DOMAIN-CONTAINING PROTEIN 8 |
| SKAU_T00161330 | - |
| SKAU_T00161340 | POTASSIUM CHANNEL, SUBFAMILY K |
| SKAU_T00161350 | |
| SKAU_T00161360 | HOMEOBOX PROTEIN EMX-RELATED |
| SKAU_T00161370 | V-TYPE PROTON ATPASE SUBUNIT B |
| SKAU_T00161380 | SHOOTIN-1 |
| SKAU_T00161390 | ENOLASE |
| SKAU_T00161400 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| SKAU_T00161410 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| SKAU_T00161420 | LIPASE |
| SKAU_T00161430 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| SKAU_T00161440 | |
| SKAU_T00161450 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00161460 | HISTONE H2A |
| SKAU_T00161470 | |
| SKAU_T00161480 | |
| SKAU_T00161490 | |
| SKAU_T00161500 |
