About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf6592_2.5TETRASPANIN
PE_Scaf6592_3.10
PE_Scaf6592_3.14DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
PE_Scaf6592_3.8
PE_Scaf6592_4.4
PE_Scaf6593_0.0
PE_Scaf6594_0.5
PE_Scaf6594_0.7
PE_Scaf6597_0.2TRANSMEMBRANE PROTEIN 179
PE_Scaf6597_1.2PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
PE_Scaf6597_4.3STERILE20-LIKE KINASE, ISOFORM B-RELATED
PE_Scaf6597_7.4
PE_Scaf6597_8.2
PE_Scaf6597_8.3LEISHMANOLYSIN-LIKE PEPTIDASE
PE_Scaf6597_9.112'-DEOXYNUCLEOSIDE 5'-PHOSPHATE N-HYDROLASE 1
PE_Scaf6597_9.8
PE_Scaf6598_0.0
PE_Scaf6598_0.1
PE_Scaf6598_0.4
PE_Scaf6598_0.5
PE_Scaf6598_0.7
PE_Scaf6599_0.3
PE_Scaf6599_1.3
PE_Scaf6599_1.4
PE_Scaf6599_2.2
PE_Scaf6599_3.4
PE_Scaf6599_3.7INNEXIN
PE_Scaf6599_4.3ENDORIBONUCLEASE LACTB2
PE_Scaf6599_4.4ACETYLGLUCOSAMINYLTRANSFERASE
PE_Scaf659_2.6
PE_Scaf659_2.8DESTABILASE-RELATED
PE_Scaf65_0.4SIMILAR TO HYPOTHETICAL PROTEIN FLJ40298
PE_Scaf65_0.6UNCHARACTERIZED
PE_Scaf6601_0.2CYCLINS
PE_Scaf6601_2.7UNCHARACTERIZED
PE_Scaf6601_2.8SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
PE_Scaf6601_4.1TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf6601_9.0
PE_Scaf6601_9.1
PE_Scaf6602_0.0
PE_Scaf6602_0.3
PE_Scaf6602_0.4
PE_Scaf6605_0.2CHITIN SYNTHASE
PE_Scaf6606_0.0
PE_Scaf6606_1.7NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
PE_Scaf6606_2.0
PE_Scaf6606_2.2
PE_Scaf6607_0.3GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
PE_Scaf6608_1.3DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER
PE_Scaf6608_1.4WD REPEAT DOMAIN 9
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