About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf6574_1.0
PE_Scaf6574_1.4
PE_Scaf6574_2.10
PE_Scaf6574_2.3
PE_Scaf6576_4.0
PE_Scaf6576_6.4ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
PE_Scaf6578_0.4
PE_Scaf6582_10.3
PE_Scaf6582_2.0
PE_Scaf6582_2.6
PE_Scaf6582_4.4THREE PRIME REPAIR EXONUCLEASE 1, 2
PE_Scaf6582_6.1THIOREDOXIN PEROXIDASE
PE_Scaf6582_7.5DYNEIN INTERMEDIATE CHAIN
PE_Scaf6582_8.4METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
PE_Scaf6582_9.3PEROXISOMAL BIOGENESIS FACTOR 3
PE_Scaf6584_0.0COLLAGEN ALPHA
PE_Scaf6585_0.4OXIDASE/PEROXIDASE
PE_Scaf6585_0.5THIOESTERASE SUPERFAMILY MEMBER-RELATED
PE_Scaf6585_1.4
PE_Scaf6587_0.0
PE_Scaf6589_0.2UNCHARACTERIZED
PE_Scaf6589_1.2TRANSMEMBRANE PROTEIN HTP-1 RELATED
PE_Scaf6589_1.4
PE_Scaf6589_10.3CRUMBS FAMILY MEMBER
PE_Scaf6589_11.0
PE_Scaf6589_11.1
PE_Scaf6589_11.2
PE_Scaf6589_12.4CRUMBS FAMILY MEMBER
PE_Scaf6589_14.5
PE_Scaf6589_3.13TORSIN
PE_Scaf6589_3.4P-TYPE CATION-TRANSPORTING ATPASE
PE_Scaf6589_4.1TORSIN
PE_Scaf6589_5.10ATP7, ISOFORM B
PE_Scaf6589_5.12UNCHARACTERIZED
PE_Scaf6589_5.9
PE_Scaf6589_6.4ZINC FINGER PROTEIN
PE_Scaf6589_6.5
PE_Scaf6589_7.1
PE_Scaf6589_8.2CRUMBS FAMILY MEMBER
PE_Scaf6589_9.5
PE_Scaf658_0.4
PE_Scaf658_1.3RNA-BINDING PROTEIN RELATED
PE_Scaf658_3.11KRUEPPEL-LIKE TRANSCRIPTION FACTOR
PE_Scaf658_3.12
PE_Scaf6591_0.0
PE_Scaf6592_0.0
PE_Scaf6592_0.2-
PE_Scaf6592_1.5TETRASPANIN
PE_Scaf6592_1.6TETRASPANIN
PE_Scaf6592_2.3TETRASPANIN
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