About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf5657_0.2
PE_Scaf5657_1.10NEPHRIN
PE_Scaf5657_1.11
PE_Scaf5658_0.5ENVOPLAKIN
PE_Scaf5659_0.4PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF
PE_Scaf565_0.1
PE_Scaf5660_1.8
PE_Scaf5660_1.9SET DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf5662_1.8HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
PE_Scaf5662_2.10UNCHARACTERIZED
PE_Scaf5662_2.11SARCOGLYCAN
PE_Scaf5662_2.4
PE_Scaf5662_2.9YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
PE_Scaf5664_0.3NOTCH LIGAND FAMILY MEMBER
PE_Scaf5667_0.3METHYLMALONYL-COA MUTASE
PE_Scaf5667_0.9METHYLMALONYL-COA MUTASE
PE_Scaf5672_0.0
PE_Scaf5672_0.1
PE_Scaf5672_0.6STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
PE_Scaf5676_0.0TRANSPOSON
PE_Scaf5676_1.2UPF0462 PROTEIN
PE_Scaf5676_2.1
PE_Scaf5676_2.6
PE_Scaf5676_3.6GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1
PE_Scaf5677_0.3ANKYRIN REPEAT PROTEIN
PE_Scaf5678_0.0
PE_Scaf5678_0.3
PE_Scaf5678_0.5
PE_Scaf5679_0.1
PE_Scaf5679_0.3
PE_Scaf5680_1.10-
PE_Scaf5680_1.9COILED-COIL DOMAIN-CONTAINING PROTEIN 78
PE_Scaf5680_10.0
PE_Scaf5680_11.0
PE_Scaf5680_12.3
PE_Scaf5680_13.0
PE_Scaf5680_13.3
PE_Scaf5680_15.1
PE_Scaf5680_15.4
PE_Scaf5680_15.5
PE_Scaf5680_16.0
PE_Scaf5680_16.8
PE_Scaf5680_16.9
PE_Scaf5680_2.22CALCIUM BINDING PROTEINS
PE_Scaf5680_2.6CALCIUM BINDING PROTEINS
PE_Scaf5680_2.7TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
PE_Scaf5680_3.2MRNA EXPORT FACTOR AND BUB3
PE_Scaf5680_6.3TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
PE_Scaf5680_7.0
PE_Scaf5680_7.2
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