About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf5632_2.6AMMONIUM TRANSPORTER
PE_Scaf5632_3.12
PE_Scaf5632_3.4AMMONIUM TRANSPORTER
PE_Scaf5632_8.3NEPHRIN
PE_Scaf5633_0.3
PE_Scaf5633_1.19WSCD FAMILY MEMBER CG9164
PE_Scaf5633_1.6GLUTAMINE SYNTHETASE
PE_Scaf5633_2.0
PE_Scaf5633_7.0
PE_Scaf5637_1.2
PE_Scaf5638_2.3SUGAR KINASE
PE_Scaf5638_3.1ALKALINE CERAMIDASE 3
PE_Scaf5638_5.2EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf5638_7.0
PE_Scaf5638_7.5FIBRILLIN-RELATED
PE_Scaf563_0.0
PE_Scaf563_0.3CABRIOLET.-RELATED
PE_Scaf5640_2.12VASCULAR CELL ADHESION MOLECULE 1
PE_Scaf5640_2.13IG-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf5640_4.10TUBULIN POLYGLUTAMYLASE
PE_Scaf5640_4.7TRANSLATION MACHINERY-ASSOCIATED PROTEIN 7
PE_Scaf5640_4.9
PE_Scaf5642_0.0COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
PE_Scaf5643_0.3MOLTING PROTEIN MLT-4
PE_Scaf5643_1.10
PE_Scaf5643_1.11
PE_Scaf5643_1.13
PE_Scaf5643_1.14
PE_Scaf5644_0.0
PE_Scaf5644_0.1
PE_Scaf5644_0.7
PE_Scaf5646_0.14BEIGE/BEACH-RELATED
PE_Scaf5646_0.16CELL FATE DETERMINING PROTEIN MAB21-RELATED
PE_Scaf5650_1.1TRANSPOSON
PE_Scaf5650_1.11DEDICATOR OF CYTOKINESIS
PE_Scaf5650_1.12PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B
PE_Scaf5650_1.6PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B
PE_Scaf5651_2.12XANTHINE DEHYDROGENASE
PE_Scaf5651_2.13XANTHINE DEHYDROGENASE
PE_Scaf5651_2.14XANTHINE DEHYDROGENASE
PE_Scaf5651_2.6
PE_Scaf5652_0.15
PE_Scaf5652_0.8GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
PE_Scaf5653_0.0
PE_Scaf5653_0.1
PE_Scaf5653_0.10
PE_Scaf5653_0.2
PE_Scaf5653_0.9
PE_Scaf5654_0.6SYNAPTOSOMAL ASSOCIATED PROTEIN
PE_Scaf5654_0.7
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