Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00141510 | |
| SKAU_T00141520 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
| SKAU_T00141530 | LYSYL OXIDASE-LIKE-RELATED |
| SKAU_T00141540 | |
| SKAU_T00141550 | |
| SKAU_T00141560 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00141570 | |
| SKAU_T00141580 | LASP |
| SKAU_T00141590 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| SKAU_T00141600 | LYSYL OXIDASE-LIKE-RELATED |
| SKAU_T00141610 | GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 |
| SKAU_T00141620 | |
| SKAU_T00141630 | GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7 |
| SKAU_T00141640 | |
| SKAU_T00141650 | FRIZZLED |
| SKAU_T00141660 | |
| SKAU_T00141670 | |
| SKAU_T00141680 | PROTRUDIN |
| SKAU_T00141690 | ZINC FINGER PROTEIN 385B-LIKE |
| SKAU_T00141700 | |
| SKAU_T00141710 | PROTEIN CBG26694 |
| SKAU_T00141720 | PROTEIN CBG26694 |
| SKAU_T00141730 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| SKAU_T00141740 | |
| SKAU_T00141750 | ARGININE VASOPRESSIN-INDUCED PROTEIN 1 |
| SKAU_T00141760 | PHOSPHATIDYLINOSITOL 4-KINASE TYPE-II |
| SKAU_T00141770 | |
| SKAU_T00141780 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
| SKAU_T00141790 | PHOSPHOGLYCERATE MUTASE |
| SKAU_T00141800 | 3'-5' EXORIBONUCLEASE CSL4-RELATED |
| SKAU_T00141810 | PALMITOYLTRANSFERASE ZDHHC16 |
| SKAU_T00141820 | DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 |
| SKAU_T00141830 | UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED |
| SKAU_T00141840 | ANTHRAX TOXIN RECEPTOR |
| SKAU_T00141850 | TGF-BETA FAMILY |
| SKAU_T00141860 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00141870 | |
| SKAU_T00141880 | |
| SKAU_T00141890 | LDOC1 RELATED |
| SKAU_T00141900 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| SKAU_T00141910 | ZINC FINGER PROTEIN |
| SKAU_T00141920 | |
| SKAU_T00141930 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00141940 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| SKAU_T00141950 | |
| SKAU_T00141960 | RHO FAMILY GTPASE |
| SKAU_T00141970 | GTP CYCLOHYDROLASE I |
| SKAU_T00141980 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00141990 | CALCIUM BINDING PROTEIN |
| SKAU_T00142000 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
