Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00140010 | |
| SKAU_T00140020 | |
| SKAU_T00140030 | COILED-COIL DOMAIN-CONTAINING PROTEIN 172 |
| SKAU_T00140040 | GDNF RECEPTOR ALPHA |
| SKAU_T00140050 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
| SKAU_T00140060 | TRNA-PSEUDOURIDINE SYNTHASE |
| SKAU_T00140070 | RAI16 PROTEIN-RELATED |
| SKAU_T00140080 | |
| SKAU_T00140090 | ACTIN-BINDING LIM PROTEIN |
| SKAU_T00140100 | ACTIN-BINDING LIM PROTEIN |
| SKAU_T00140110 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| SKAU_T00140120 | PR DOMAIN ZINC FINGER PROTEIN |
| SKAU_T00140130 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| SKAU_T00140140 | COLLAGEN ALPHA |
| SKAU_T00140150 | TUDOR DOMAIN CONTAINING PROTEIN |
| SKAU_T00140160 | CTCL TUMOR ANTIGEN HD-CL-01 |
| SKAU_T00140170 | CTCL TUMOR ANTIGEN HD-CL-01 |
| SKAU_T00140180 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00140190 | NHL REPEAT-CONTAINING PROTEIN 2 |
| SKAU_T00140200 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
| SKAU_T00140210 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY S MEMBER 1 |
| SKAU_T00140220 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00140230 | CASPASE |
| SKAU_T00140240 | NEBULIN |
| SKAU_T00140250 | NEBULIN |
| SKAU_T00140260 | NEBULIN |
| SKAU_T00140270 | TRYPSIN-RELATED |
| SKAU_T00140280 | NUCLEAR FUSION PROTEIN FUS2 |
| SKAU_T00140290 | PROTEASE M14 CARBOXYPEPTIDASE |
| SKAU_T00140300 | |
| SKAU_T00140310 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| SKAU_T00140320 | |
| SKAU_T00140330 | |
| SKAU_T00140340 | |
| SKAU_T00140350 | |
| SKAU_T00140360 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
| SKAU_T00140370 | BETA/GAMMA CRYSTALLIN |
| SKAU_T00140380 | BETA/GAMMA CRYSTALLIN |
| SKAU_T00140390 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
| SKAU_T00140400 | |
| SKAU_T00140410 | |
| SKAU_T00140420 | |
| SKAU_T00140430 | |
| SKAU_T00140440 | |
| SKAU_T00140450 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
| SKAU_T00140460 | |
| SKAU_T00140470 | |
| SKAU_T00140480 | |
| SKAU_T00140490 | |
| SKAU_T00140500 |
