Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00139010 | |
| SKAU_T00139020 | |
| SKAU_T00139030 | |
| SKAU_T00139040 | |
| SKAU_T00139050 | |
| SKAU_T00139060 | |
| SKAU_T00139070 | SRC-ASSOCIATED ADAPTOR PROTEIN |
| SKAU_T00139080 | PX DOMAIN-CONTAINING PROTEIN |
| SKAU_T00139090 | LDOC1 RELATED |
| SKAU_T00139100 | CHROMOBOX PROTEIN |
| SKAU_T00139110 | NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR |
| SKAU_T00139120 | ZETA-COAT PROTEIN |
| SKAU_T00139130 | BEN DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00139140 | |
| SKAU_T00139150 | |
| SKAU_T00139160 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 |
| SKAU_T00139170 | - |
| SKAU_T00139180 | PYRIDOXINE-5-PHOSPHATE OXIDASE |
| SKAU_T00139190 | 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL |
| SKAU_T00139200 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00139210 | T-BOX PROTEIN-RELATED |
| SKAU_T00139220 | |
| SKAU_T00139230 | PROTEIN, PUTATIVE-RELATED |
| SKAU_T00139240 | BUCENTAUR RELATED |
| SKAU_T00139250 | SERINE/THREONINE-PROTEIN KINASE PIM |
| SKAU_T00139260 | PROSAPIP2 PROTEIN/5-AZACYTIDINE INDUCED GENE 2 |
| SKAU_T00139270 | |
| SKAU_T00139280 | |
| SKAU_T00139290 | |
| SKAU_T00139300 | |
| SKAU_T00139310 | |
| SKAU_T00139320 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00139330 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00139340 | PYRUVATE DEHYDROGENASE KINASE |
| SKAU_T00139350 | PROTEIN CBG26694 |
| SKAU_T00139360 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00139370 | MYOSIN |
| SKAU_T00139380 | CYCLIN DEPENDANT KINASE-5 ACTIVATOR |
| SKAU_T00139390 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| SKAU_T00139400 | VESICULAR-FUSION PROTEIN NSF |
| SKAU_T00139410 | ORMDL PROTEINS |
| SKAU_T00139420 | GASDERMIN |
| SKAU_T00139430 | |
| SKAU_T00139440 | |
| SKAU_T00139450 | |
| SKAU_T00139460 | GASDERMIN |
| SKAU_T00139470 | GASDERMIN |
| SKAU_T00139480 | TRANSPOSON |
| SKAU_T00139490 | |
| SKAU_T00139500 |
