About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4756_2.2STEROL DESATURASE
PE_Scaf4756_20.0
PE_Scaf4756_20.2PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
PE_Scaf4756_21.3MIDNOLIN
PE_Scaf4756_22.10NADH-CYTOCHROME B5 REDUCTASE
PE_Scaf4756_22.12
PE_Scaf4756_5.4MACROGLOBULIN / COMPLEMENT
PE_Scaf4756_6.0
PE_Scaf4756_9.7MACROGLOBULIN / COMPLEMENT
PE_Scaf4757_1.6VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
PE_Scaf4757_1.7VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B
PE_Scaf4757_1.9
PE_Scaf4758_0.0
PE_Scaf4759_0.2
PE_Scaf475_3.4ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
PE_Scaf475_3.5OS09G0557700 PROTEIN
PE_Scaf475_4.2
PE_Scaf475_4.8GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4
PE_Scaf475_5.6RFWD3 PROTEIN
PE_Scaf475_6.0
PE_Scaf475_6.5OXYSTEROL-BINDING PROTEIN-RELATED
PE_Scaf4760_0.0
PE_Scaf4760_1.2SULFIDE:QUINONE OXIDOREDUCTASE
PE_Scaf4760_2.1KRAB AND ZINC FINGER DOMAIN-CONTAINING
PE_Scaf4760_3.4USP DOMAIN-CONTAINING PROTEIN
PE_Scaf4760_4.2ZINC FINGER PROTEIN
PE_Scaf4760_5.0
PE_Scaf4760_6.4NUP107-RELATED
PE_Scaf4760_7.0
PE_Scaf4761_1.0
PE_Scaf4761_2.0
PE_Scaf4762_0.5ACYL-COENZYME A SYNTHETASE
PE_Scaf4764_0.5PEPTIDOGLYCAN RECOGNITION PROTEIN
PE_Scaf4765_0.1
PE_Scaf4765_1.6ORGANIC ANION TRANSPORTER
PE_Scaf4770_1.3AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
PE_Scaf4770_2.4
PE_Scaf4771_0.0
PE_Scaf4771_0.1
PE_Scaf4772_0.8DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PE_Scaf4772_0.9DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PE_Scaf4772_1.8DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PE_Scaf4772_1.9DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
PE_Scaf4772_2.2RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN
PE_Scaf4772_3.4M-PHASE PHOSPHOPROTEIN 6
PE_Scaf4772_3.5METAXIN RELATED
PE_Scaf4772_3.6HEAT SHOCK TRANSCRIPTION FACTOR
PE_Scaf4772_4.4UNCHARACTERIZED
PE_Scaf4772_4.5METALLO PHOSPHOESTERASE RELATED
PE_Scaf4772_4.8LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
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