About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4640_1.7TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf4640_3.0
PE_Scaf4640_3.1
PE_Scaf4640_5.1RIBOSOMAL PROTEIN S6 KINASE
PE_Scaf4640_6.5PHD FINGER TRANSCRIPTION FACTOR
PE_Scaf4640_8.2RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
PE_Scaf4640_9.1
PE_Scaf4640_9.12
PE_Scaf4640_9.13
PE_Scaf4640_9.17HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
PE_Scaf4640_9.19
PE_Scaf4640_9.2
PE_Scaf4641_0.3E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER
PE_Scaf4641_1.6UNCHARACTERIZED
PE_Scaf4641_1.7MYOSIN
PE_Scaf4643_2.5MICROTUBULE-ASSOCIATED PROTEIN 9
PE_Scaf4643_3.11
PE_Scaf4643_3.12
PE_Scaf4643_3.13ZINC FINGER AND BTB DOMAIN-CONTAINING
PE_Scaf4643_3.2
PE_Scaf4643_3.21INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
PE_Scaf4643_3.23RING ZINC FINGER PROTEIN
PE_Scaf4645_0.0
PE_Scaf4645_0.4LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf4646_3.2COLLAGEN ALPHA
PE_Scaf4647_0.0
PE_Scaf4647_0.1
PE_Scaf4647_0.2
PE_Scaf4647_0.7
PE_Scaf464_0.3SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
PE_Scaf4652_0.0
PE_Scaf4652_0.1
PE_Scaf4652_0.11SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PE_Scaf4652_0.9SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PE_Scaf4653_0.3
PE_Scaf4653_1.0
PE_Scaf4653_1.1
PE_Scaf4653_1.3
PE_Scaf4653_1.4
PE_Scaf4654_0.0
PE_Scaf4654_3.0RETROTRANSPOSON
PE_Scaf4654_3.3SH2 DOMAIN CONTAINING PROTEIN
PE_Scaf4657_0.0
PE_Scaf4657_0.1
PE_Scaf4657_0.2
PE_Scaf4659_1.5UNCHARACTERIZED
PE_Scaf4659_2.4ERO1-RELATED
PE_Scaf4659_2.5INTEGRAL MEMBRANE PROTEIN GPR137
PE_Scaf4659_3.13SOLEUCYL-TRNA SYNTHETASE
PE_Scaf4659_3.15KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
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