Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00125510 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00125520 | CHROMOBOX PROTEIN HOMOLOG 2 |
| SKAU_T00125530 | PROTEIN CBG26694 |
| SKAU_T00125540 | CHROMOBOX PROTEIN HOMOLOG 2 |
| SKAU_T00125550 | CHROMOBOX PROTEIN HOMOLOG 2 |
| SKAU_T00125560 | |
| SKAU_T00125570 | UNCHARACTERIZED |
| SKAU_T00125580 | |
| SKAU_T00125590 | |
| SKAU_T00125600 | PHOSPHOINOSITIDE-INTERACTING PROTEIN FAMILY MEMBER |
| SKAU_T00125610 | |
| SKAU_T00125620 | |
| SKAU_T00125630 | THYROTROPH EMBRYONIC FACTOR RELATED |
| SKAU_T00125640 | MULTIPLE PDZ DOMAIN PROTEIN |
| SKAU_T00125650 | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED |
| SKAU_T00125660 | LD44762P |
| SKAU_T00125670 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| SKAU_T00125680 | CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED |
| SKAU_T00125690 | |
| SKAU_T00125700 | |
| SKAU_T00125710 | PROTEIN SHISA-9-RELATED |
| SKAU_T00125720 | DYNEIN HEAVY CHAIN |
| SKAU_T00125730 | |
| SKAU_T00125740 | MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00125750 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| SKAU_T00125760 | - |
| SKAU_T00125770 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00125780 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00125790 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| SKAU_T00125800 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00125810 | PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE |
| SKAU_T00125820 | CALCIUM BINDING PROTEINS |
| SKAU_T00125830 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| SKAU_T00125840 | GASTROKINE 1 |
| SKAU_T00125850 | G BETA-LIKE PROTEIN GBL |
| SKAU_T00125860 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| SKAU_T00125870 | HEPARAN SULFATE SULFOTRANSFERASE |
| SKAU_T00125880 | - |
| SKAU_T00125890 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00125900 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| SKAU_T00125910 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
| SKAU_T00125920 | WU:FJ29H11 |
| SKAU_T00125930 | WU:FJ29H11 |
| SKAU_T00125940 | DILUTE DOMAIN-CONTAINING PROTEIN YPR089W |
| SKAU_T00125950 | SEROTONIN N-ACETYLTRANSFERASE |
| SKAU_T00125960 | INACTIVE RHOMBOID PROTEIN |
| SKAU_T00125970 | |
| SKAU_T00125980 | |
| SKAU_T00125990 | |
| SKAU_T00126000 |
