Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00123510 | E3 SUMO-PROTEIN LIGASE CBX4 |
| SKAU_T00123520 | |
| SKAU_T00123530 | |
| SKAU_T00123540 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| SKAU_T00123550 | CASPASE RECRUITMENT DOMAIN FAMILY |
| SKAU_T00123560 | DED DOMAIN-CONTAINING PROTEIN |
| SKAU_T00123570 | IRE1-RELATED |
| SKAU_T00123580 | TEX2 PROTEIN-RELATED |
| SKAU_T00123590 | |
| SKAU_T00123600 | |
| SKAU_T00123610 | AXIN |
| SKAU_T00123620 | AXIN |
| SKAU_T00123630 | |
| SKAU_T00123640 | |
| SKAU_T00123650 | |
| SKAU_T00123660 | |
| SKAU_T00123670 | |
| SKAU_T00123680 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| SKAU_T00123690 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00123700 | |
| SKAU_T00123710 | |
| SKAU_T00123720 | |
| SKAU_T00123730 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00123740 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00123750 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA-1 SUBUNIT-RELATED |
| SKAU_T00123760 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
| SKAU_T00123770 | |
| SKAU_T00123780 | |
| SKAU_T00123790 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
| SKAU_T00123800 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
| SKAU_T00123810 | UNCHARACTERIZED |
| SKAU_T00123820 | NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF |
| SKAU_T00123830 | UPF0450 PROTEIN C17ORF58 |
| SKAU_T00123840 | |
| SKAU_T00123850 | IMPORTIN ALPHA |
| SKAU_T00123860 | |
| SKAU_T00123870 | |
| SKAU_T00123880 | |
| SKAU_T00123890 | |
| SKAU_T00123900 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| SKAU_T00123910 | UNCHARACTERIZED |
| SKAU_T00123920 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00123930 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| SKAU_T00123940 | SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN |
| SKAU_T00123950 | ENVOPLAKIN |
| SKAU_T00123960 | CST COMPLEX SUBUNIT TEN1 |
| SKAU_T00123970 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| SKAU_T00123980 | INACTIVE RHOMBOID PROTEIN |
| SKAU_T00123990 | SEROTONIN N-ACETYLTRANSFERASE |
| SKAU_T00124000 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
