Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00121510 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00121520 | SOX100B |
| SKAU_T00121530 | DNA-DIRECTED RNA POLYMERASE SUBUNIT K |
| SKAU_T00121540 | UPF0193 PROTEIN EVG1 |
| SKAU_T00121550 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| SKAU_T00121560 | GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN |
| SKAU_T00121570 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
| SKAU_T00121580 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22 |
| SKAU_T00121590 | TRANSCRIPTION FACTOR MAF |
| SKAU_T00121600 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| SKAU_T00121610 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
| SKAU_T00121620 | ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV |
| SKAU_T00121630 | |
| SKAU_T00121640 | CDC42 EFFECTOR PROTEIN BORG |
| SKAU_T00121650 | 3BP-1 RELATED RHOGAP |
| SKAU_T00121660 | 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN PDGF-ASSOCIATED PROTEIN |
| SKAU_T00121670 | MONOCARBOXYLATE TRANSPORTER |
| SKAU_T00121680 | |
| SKAU_T00121690 | PHOSPHOLIPASE B-RELATED |
| SKAU_T00121700 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
| SKAU_T00121710 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
| SKAU_T00121720 | GUANYLYL CYCLASE |
| SKAU_T00121730 | PHOSPHOMANNOMUTASE |
| SKAU_T00121740 | |
| SKAU_T00121750 | MATRIX GLA PROTEIN |
| SKAU_T00121760 | OSTEOCALCIN |
| SKAU_T00121770 | |
| SKAU_T00121780 | |
| SKAU_T00121790 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| SKAU_T00121800 | |
| SKAU_T00121810 | |
| SKAU_T00121820 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00121830 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00121840 | |
| SKAU_T00121850 | |
| SKAU_T00121860 | |
| SKAU_T00121870 | |
| SKAU_T00121880 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
| SKAU_T00121890 | |
| SKAU_T00121900 | HEME OXYGENASE |
| SKAU_T00121910 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00121920 | |
| SKAU_T00121930 | T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED |
| SKAU_T00121940 | |
| SKAU_T00121950 | FORKHEAD BOX PROTEIN |
| SKAU_T00121960 | GATA-TYPE ZINC FINGER PROTEIN 1 |
| SKAU_T00121970 | FERREDOXIN/ADRENODOXIN |
| SKAU_T00121980 | |
| SKAU_T00121990 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00122000 | KELCH PROTEIN |
