The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g21068 | BONUS, ISOFORM C-RELATED |
| MBSQW58_g21069 | TUDOR DOMAIN CONTAINING PROTEIN |
| MBSQW58_g2107 | |
| MBSQW58_g21070 | TETRATRICOPEPTIDE REPEAT PROTEIN 19 |
| MBSQW58_g21071 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
| MBSQW58_g21072 | |
| MBSQW58_g21073 | LEUKOTRIENE A-4 HYDROLASE |
| MBSQW58_g21074 | NETRIN/LAMININ-RELATED |
| MBSQW58_g21075 | METALLOPROTEASE |
| MBSQW58_g21076 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g21077 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| MBSQW58_g21078 | MYOSIN VII, XV |
| MBSQW58_g21079 | |
| MBSQW58_g2108 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| MBSQW58_g21080 | ACETYLCHOLINESTERASE |
| MBSQW58_g21081 | METALLOPROTEASE TLDD |
| MBSQW58_g21082 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED |
| MBSQW58_g21083 | SUGAR TRANSPORTER |
| MBSQW58_g21084 | GLYPICAN |
| MBSQW58_g21085 | |
| MBSQW58_g21086 | |
| MBSQW58_g21087 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| MBSQW58_g21088 | RP42 RELATED |
| MBSQW58_g21089 | SCHLAFEN |
| MBSQW58_g2109 | PHOSPHOLIPASE B-RELATED |
| MBSQW58_g21090 | MUCIN 4-RELATED |
| MBSQW58_g21091 | VESICLE-TRAFFICKING PROTEIN SEC22B |
| MBSQW58_g21092 | RGPR-RELATED |
| MBSQW58_g21093 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| MBSQW58_g21094 | TYROSINE-PROTEIN KINASE RECEPTOR |
| MBSQW58_g21095 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g21096 | PROTEIN FAM78A |
| MBSQW58_g21097 | |
| MBSQW58_g21098 | NUCLEAR PORE COMPLEX PROTEIN NUP |
| MBSQW58_g21099 | |
| MBSQW58_g211 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
| MBSQW58_g2110 | NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE CONTAINING PROTEIN |
| MBSQW58_g21100 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g21101 | |
| MBSQW58_g21102 | |
| MBSQW58_g21103 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| MBSQW58_g21104 | |
| MBSQW58_g21105 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g21106 | ZINC FINGER PROTEIN |
| MBSQW58_g21107 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
| MBSQW58_g21108 | |
| MBSQW58_g21109 | |
| MBSQW58_g2111 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| MBSQW58_g21110 | |
| MBSQW58_g21111 |
