Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00110510 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11 |
| SKAU_T00110520 | |
| SKAU_T00110530 | PROTEIN CBG26694 |
| SKAU_T00110540 | |
| SKAU_T00110550 | FOLLISTATIN-RELATED |
| SKAU_T00110560 | |
| SKAU_T00110570 | |
| SKAU_T00110580 | |
| SKAU_T00110590 | |
| SKAU_T00110600 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| SKAU_T00110610 | |
| SKAU_T00110620 | |
| SKAU_T00110630 | |
| SKAU_T00110640 | PGC-1 AND ERR-INDUCED REGULATOR IN MUSCLE PROTEIN 1 |
| SKAU_T00110650 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY N MEMBER 1 |
| SKAU_T00110660 | LD33804P |
| SKAU_T00110670 | KELCH PROTEIN |
| SKAU_T00110680 | POLYCOMB GROUP PROTEIN |
| SKAU_T00110690 | ATROPHIN-RELATED |
| SKAU_T00110700 | |
| SKAU_T00110710 | |
| SKAU_T00110720 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
| SKAU_T00110730 | |
| SKAU_T00110740 | |
| SKAU_T00110750 | |
| SKAU_T00110760 | |
| SKAU_T00110770 | |
| SKAU_T00110780 | |
| SKAU_T00110790 | |
| SKAU_T00110800 | ENOLASE |
| SKAU_T00110810 | CARBONIC ANHYDRASE |
| SKAU_T00110820 | SOLUTE CARRIER FAMILY 2 |
| SKAU_T00110830 | |
| SKAU_T00110840 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| SKAU_T00110850 | |
| SKAU_T00110860 | |
| SKAU_T00110870 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
| SKAU_T00110880 | TRANSMEMBRANE PROTEIN 201 |
| SKAU_T00110890 | FORKHEAD BOX PROTEIN |
| SKAU_T00110900 | |
| SKAU_T00110910 | CALSYNTENIN |
| SKAU_T00110920 | FATTY ACID BINDING PROTEIN |
| SKAU_T00110930 | FATTY ACID BINDING PROTEIN |
| SKAU_T00110940 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00110950 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00110960 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00110970 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00110980 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00110990 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00111000 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
