Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00107510 | |
| SKAU_T00107520 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00107530 | ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN |
| SKAU_T00107540 | ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN |
| SKAU_T00107550 | NETRIN/LAMININ-RELATED |
| SKAU_T00107560 | |
| SKAU_T00107570 | 40S RIBOSOMAL PROTEIN S21 |
| SKAU_T00107580 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| SKAU_T00107590 | XK-RELATED PROTEIN |
| SKAU_T00107600 | |
| SKAU_T00107610 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00107620 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| SKAU_T00107630 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| SKAU_T00107640 | REGULATOR OF G PROTEIN SIGNALING |
| SKAU_T00107650 | PROTEIN LKAAEAR1 |
| SKAU_T00107660 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00107670 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00107680 | |
| SKAU_T00107690 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| SKAU_T00107700 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| SKAU_T00107710 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| SKAU_T00107720 | ZINC FINGER PROTEIN |
| SKAU_T00107730 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| SKAU_T00107740 | |
| SKAU_T00107750 | TYROSINE-PROTEIN KINASE |
| SKAU_T00107760 | RETINOBLASTOMA BINDING PROTEIN 8 |
| SKAU_T00107770 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| SKAU_T00107780 | |
| SKAU_T00107790 | |
| SKAU_T00107800 | |
| SKAU_T00107810 | |
| SKAU_T00107820 | ORGANIC ANION TRANSPORTER |
| SKAU_T00107830 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00107840 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| SKAU_T00107850 | SYNTENIN RELATED |
| SKAU_T00107860 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| SKAU_T00107870 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| SKAU_T00107880 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| SKAU_T00107890 | UBX DOMAIN CONTAINING PROTEIN |
| SKAU_T00107900 | AGAP005440-PA |
| SKAU_T00107910 | |
| SKAU_T00107920 | |
| SKAU_T00107930 | CYTOCHROME C OXIDASE SUBUNIT IV |
| SKAU_T00107940 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00107950 | PAR-6-RELATED |
| SKAU_T00107960 | NEUROPROTECTIVE PEPTIDE-CONTAINING PROTEIN |
| SKAU_T00107970 | |
| SKAU_T00107980 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 |
| SKAU_T00107990 | COLLAGEN ALPHA |
| SKAU_T00108000 | SOLUTE CARRIER FAMILY 35 |
