Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00105510 | PAK4-INHIBITOR INKA1-RELATED |
| SKAU_T00105520 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00105530 | AMINO ACID TRANSPORTER |
| SKAU_T00105540 | RNA-BINDING PROTEIN |
| SKAU_T00105550 | PROTEIN BRICK1 |
| SKAU_T00105560 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00105570 | GLUTATHIONE PEROXIDASE |
| SKAU_T00105580 | TESTIS-EXPRESSED PROTEIN 264 |
| SKAU_T00105590 | |
| SKAU_T00105600 | |
| SKAU_T00105610 | METABOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00105620 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| SKAU_T00105630 | MIR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00105640 | SULFATASE MODIFYING FACTOR 1, 2 |
| SKAU_T00105650 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00105660 | PROTEIN CBG26694 |
| SKAU_T00105670 | SORTING NEXIN FAMILY MEMBER |
| SKAU_T00105680 | DNAJ HOMOLOG SUBFAMILY B MEMBER 9 |
| SKAU_T00105690 | CEREBLON |
| SKAU_T00105700 | |
| SKAU_T00105710 | |
| SKAU_T00105720 | DEOXYRIBONUCLEASE TATDN2-RELATED |
| SKAU_T00105730 | |
| SKAU_T00105740 | |
| SKAU_T00105750 | FACIOGENITAL DYSPLASIA PROTEIN |
| SKAU_T00105760 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00105770 | ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED |
| SKAU_T00105780 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00105790 | POLYCOMB GROUP PROTEIN |
| SKAU_T00105800 | VACUOLAR MEMBRANE PROTEIN YPL162C |
| SKAU_T00105810 | |
| SKAU_T00105820 | RUVB-RELATED REPTIN AND PONTIN |
| SKAU_T00105830 | ELONGATION FACTOR TU-RELATED |
| SKAU_T00105840 | |
| SKAU_T00105850 | |
| SKAU_T00105860 | |
| SKAU_T00105870 | |
| SKAU_T00105880 | |
| SKAU_T00105890 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| SKAU_T00105900 | |
| SKAU_T00105910 | |
| SKAU_T00105920 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00105930 | RAB FAMILY |
| SKAU_T00105940 | TRANSCRIPTIONAL ADAPTER 3-RELATED |
| SKAU_T00105950 | ARP2/3 COMPLEX 20 KD SUBUNIT |
| SKAU_T00105960 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE |
| SKAU_T00105970 | |
| SKAU_T00105980 | |
| SKAU_T00105990 | |
| SKAU_T00106000 | SERINE/THREONINE-PROTEIN KINASE |
