Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00104510 | HIGH MOBILITY GROUP PROTEINS HMG-A AND C |
| SKAU_T00104520 | SMALL INTEGRAL MEMBRANE PROTEIN 29 |
| SKAU_T00104530 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| SKAU_T00104540 | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE |
| SKAU_T00104550 | 40S RIBOSOMAL PROTEIN S10 |
| SKAU_T00104560 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| SKAU_T00104570 | |
| SKAU_T00104580 | ETS |
| SKAU_T00104590 | OVARIAN CARCINOMA ANTIGEN CA125-RELATED |
| SKAU_T00104600 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C |
| SKAU_T00104610 | UNCHARACTERIZED |
| SKAU_T00104620 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00104630 | |
| SKAU_T00104640 | |
| SKAU_T00104650 | MHC CLASS I-RELATED |
| SKAU_T00104660 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| SKAU_T00104670 | |
| SKAU_T00104680 | |
| SKAU_T00104690 | |
| SKAU_T00104700 | |
| SKAU_T00104710 | |
| SKAU_T00104720 | |
| SKAU_T00104730 | PLEXIN |
| SKAU_T00104740 | |
| SKAU_T00104750 | |
| SKAU_T00104760 | |
| SKAU_T00104770 | |
| SKAU_T00104780 | |
| SKAU_T00104790 | |
| SKAU_T00104800 | |
| SKAU_T00104810 | SULFATE TRANSPORTER |
| SKAU_T00104820 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE |
| SKAU_T00104830 | |
| SKAU_T00104840 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| SKAU_T00104850 | |
| SKAU_T00104860 | SPECIFICALLY ANDROGEN-REGULATED GENE PROTEIN |
| SKAU_T00104870 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| SKAU_T00104880 | |
| SKAU_T00104890 | |
| SKAU_T00104900 | PLEXIN |
| SKAU_T00104910 | PLEXIN |
| SKAU_T00104920 | |
| SKAU_T00104930 | |
| SKAU_T00104940 | |
| SKAU_T00104950 | COMPLEMENT FACTOR H-RELATED |
| SKAU_T00104960 | |
| SKAU_T00104970 | |
| SKAU_T00104980 | |
| SKAU_T00104990 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| SKAU_T00105000 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
