Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00111010 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00111020 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| SKAU_T00111030 | 6-PHOSPHOGLUCONATE DEHYDROGENASE |
| SKAU_T00111040 | SOMATOSTATIN |
| SKAU_T00111050 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| SKAU_T00111060 | GENE 572-RELATED |
| SKAU_T00111070 | REVERSE TRANSCRIPTASES |
| SKAU_T00111080 | |
| SKAU_T00111090 | |
| SKAU_T00111100 | |
| SKAU_T00111110 | |
| SKAU_T00111120 | |
| SKAU_T00111130 | TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED |
| SKAU_T00111140 | |
| SKAU_T00111150 | |
| SKAU_T00111160 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
| SKAU_T00111170 | CELL DEATH ACTIVATOR CIDE |
| SKAU_T00111180 | |
| SKAU_T00111190 | TRYPSIN-RELATED |
| SKAU_T00111200 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| SKAU_T00111210 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| SKAU_T00111220 | |
| SKAU_T00111230 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00111240 | |
| SKAU_T00111250 | |
| SKAU_T00111260 | 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE |
| SKAU_T00111270 | MATRIX METALLOPROTEINASE |
| SKAU_T00111280 | CELL DIVISION PROTEIN KINASE |
| SKAU_T00111290 | SOLUTE CARRIER FAMILY 35 |
| SKAU_T00111300 | - |
| SKAU_T00111310 | NAD KINASE |
| SKAU_T00111320 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
| SKAU_T00111330 | |
| SKAU_T00111340 | |
| SKAU_T00111350 | TRANSMEMBRANE PROTEIN 52 |
| SKAU_T00111360 | UNCHARACTERIZED |
| SKAU_T00111370 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00111380 | TMEM26 PROTEIN |
| SKAU_T00111390 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00111400 | ADHERENS JUNCTION-ASSOCIATED PROTEIN 1 |
| SKAU_T00111410 | |
| SKAU_T00111420 | |
| SKAU_T00111430 | |
| SKAU_T00111440 | |
| SKAU_T00111450 | |
| SKAU_T00111460 | |
| SKAU_T00111470 | |
| SKAU_T00111480 | |
| SKAU_T00111490 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00111500 |
