About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4033_0.0
PE_Scaf4035_0.0
PE_Scaf4035_0.1
PE_Scaf4035_0.10HISTONE H2B
PE_Scaf4035_0.2
PE_Scaf4035_1.19HISTONE H2B
PE_Scaf4035_1.29HISTONE H2B
PE_Scaf4035_1.4HISTONE H2B
PE_Scaf4035_2.0
PE_Scaf4035_2.3HISTONE H2B
PE_Scaf4035_2.6PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
PE_Scaf4035_5.2GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
PE_Scaf4035_6.11PREFOLDIN SUBUNIT 3
PE_Scaf4035_6.14ASSOCIATE OF C-MYC AMY-1
PE_Scaf4035_6.6CULLIN
PE_Scaf4035_8.4SERINE/THREONINE-PROTEIN KINASE ATM
PE_Scaf4036_0.4MUCIN 4-RELATED
PE_Scaf4036_0.8
PE_Scaf4039_0.3
PE_Scaf4039_0.4
PE_Scaf4041_1.6FERM DOMAIN-CONTAINING PROTEIN 4
PE_Scaf4041_2.4INOSITOL POLYPHOSPHATE KINASE 1
PE_Scaf4042_0.0
PE_Scaf4042_0.4
PE_Scaf4042_0.7
PE_Scaf4042_0.8
PE_Scaf4044_0.2DELTA ADAPTIN-RELATED
PE_Scaf4045_0.0
PE_Scaf4045_0.3
PE_Scaf4046_0.0
PE_Scaf4046_0.4
PE_Scaf4046_1.3AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT
PE_Scaf4046_10.3
PE_Scaf4046_10.5
PE_Scaf4046_4.0
PE_Scaf4046_5.12LSM12 HOMOLOG
PE_Scaf4046_5.3N-ACETYLGALACTOSAMINYLTRANSFERASE
PE_Scaf4046_8.5FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf4047_0.0
PE_Scaf4047_0.1
PE_Scaf4047_0.4
PE_Scaf4047_1.0PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
PE_Scaf4047_1.3
PE_Scaf4047_1.4
PE_Scaf4048_0.3AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf4049_0.5
PE_Scaf4049_0.6
PE_Scaf404_0.2BETA1,3-GALACTOSYLTRANSFERASE
PE_Scaf404_0.3
PE_Scaf4050_0.2
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