About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf3976_1.2
PE_Scaf3976_1.6
PE_Scaf3979_0.0
PE_Scaf3979_0.2
PE_Scaf3979_0.3
PE_Scaf397_0.2ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
PE_Scaf3981_0.0
PE_Scaf3982_0.3
PE_Scaf3982_1.6TYROSINE-PROTEIN KINASE
PE_Scaf3982_2.6-
PE_Scaf3982_3.5DNAJ-LIKE-2, ISOFORM A-RELATED
PE_Scaf3983_0.5
PE_Scaf3984_0.1
PE_Scaf3984_0.4
PE_Scaf3985_0.0
PE_Scaf3985_1.17MODULATOR OF SMOOTHENED PROTEIN
PE_Scaf3985_1.3ACONITATE HYDRATASE B
PE_Scaf3985_1.4CLUSTERIN ASSOCIATED PROTEIN 1
PE_Scaf3985_2.0THAP DOMAIN PROTEIN
PE_Scaf3985_4.0PROTEIN FAM47B
PE_Scaf3985_4.6GUANINE NUCLEOTIDE EXCHANGE FACTOR
PE_Scaf3986_0.0
PE_Scaf3986_1.1
PE_Scaf3986_1.5
PE_Scaf3986_2.1ALKALINE CERAMIDASE
PE_Scaf3986_3.7UNC80
PE_Scaf3986_4.4MALATE AND LACTATE DEHYDROGENASE
PE_Scaf3990_0.0
PE_Scaf3990_0.8
PE_Scaf3991_1.12METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
PE_Scaf3991_1.13UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PE_Scaf3991_1.9CHROMOSOME 16 OPEN READING FRAME 96
PE_Scaf3992_11.4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
PE_Scaf3992_12.3
PE_Scaf3992_14.1NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
PE_Scaf3992_18.0
PE_Scaf3992_18.6ZINC FINGER PROTEIN
PE_Scaf3992_18.7DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
PE_Scaf3992_19.6
PE_Scaf3992_19.7UNCHARACTERIZED
PE_Scaf3992_22.7-
PE_Scaf3992_22.9
PE_Scaf3992_25.3ACTIN-BINDING LIM PROTEIN
PE_Scaf3992_26.0
PE_Scaf3992_27.2ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
PE_Scaf3992_27.4HISTONE H2A
PE_Scaf3994_0.0
PE_Scaf3994_0.2
PE_Scaf3994_0.4
PE_Scaf3997_1.3NEUROTRANSMITTER GATED ION CHANNEL
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