About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 215 216 217 218 219 220 221 222 223 224 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2189910.1FANCONI ANEMIA GROUP E PROTEIN
KAK2189911.1FANCONI ANEMIA GROUP E PROTEIN
KAK2189912.1-
KAK2189913.1-
KAK2189914.1GLUTAMATE 5-KINASE
KAK2189915.1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
KAK2189916.1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
KAK2189917.1DUAL SPECIFICITY PROTEIN KINASE
KAK2189918.1-
KAK2189919.1DUAL SPECIFICITY PROTEIN KINASE
KAK2189920.1-
KAK2189840.1CGI-121 FAMILY MEMBER
KAK2189841.1SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20
KAK2189842.1LD33804P
KAK2189843.1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
KAK2189844.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
KAK2189845.1TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR
KAK2189846.1-
KAK2189847.1DNA2/NAM7 HELICASE FAMILY
KAK2189848.1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
TOP