About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45626ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45627-
Paelopatides45628PROTEIN CBG26694
Paelopatides45629-
Paelopatides45630SLR5058 PROTEIN
Paelopatides45631CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN
Paelopatides45632EPM2A-INTERACTING PROTEIN 1
Paelopatides45633-
Paelopatides45634ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45635ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45636MEIOTIC RECOMBINATION PROTEIN SPO11
Paelopatides45640TRANSPOSON
Paelopatides45641PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides45642UNCHARACTERIZED
Paelopatides45643UNCHARACTERIZED
Paelopatides45644UNCHARACTERIZED
Paelopatides45645CYTOCHROME P450 FAMILY 1
Paelopatides45651-
Paelopatides45652ENDONUCLEASE-RELATED
Paelopatides45653ASPARTYL PROTEASE DDI-RELATED
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