The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032869021.1 | PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN |
| XP_032869022.1 | UNCHARACTERIZED |
| XP_032869023.1 | BONUS, ISOFORM C-RELATED |
| XP_032869024.1 | BONUS, ISOFORM C-RELATED |
| XP_032869025.1 | BONUS, ISOFORM C-RELATED |
| XP_032869026.1 | BONUS, ISOFORM C-RELATED |
| XP_032869027.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| XP_032869028.1 | BONUS, ISOFORM C-RELATED |
| XP_032869029.1 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
| XP_032869030.1 | TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE |
| XP_032869031.1 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
| XP_032869032.1 | PROTEIN DISULFIDE ISOMERASE |
| XP_032869033.1 | |
| XP_032869034.1 | GALECTIN |
| XP_032869035.1 | INTERFERON REGULATORY FACTOR |
| XP_032869036.1 | SYNEMBRYN |
| XP_032869037.1 | TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE |
| XP_032869038.1 | NFAT ACTIVATION MOLECULE 1 |
| XP_032869039.1 | UPF0193 PROTEIN EVG1 |
| XP_032869040.1 | PROTEIN FAM227B |
| XP_032869041.1 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
| XP_032869042.1 | TYROSINASE FAMILY MEMBER |
| XP_032869043.1 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
| XP_032869044.1 | CENTROMERE PROTEIN M |
| XP_032869045.1 | TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE |
| XP_032869046.1 | RUVB-RELATED REPTIN AND PONTIN |
| XP_032869047.1 | TRANSPOSASE |
| XP_032869048.1 | |
| XP_032869049.1 | |
| XP_032869050.1 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| XP_032869051.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032869052.1 | UNCHARACTERIZED |
| XP_032869053.1 | DUDULIN-RELATED |
| XP_032869054.1 | GLYCOGEN SYNTHASE |
| XP_032869055.1 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
| XP_032869056.1 | |
| XP_032869057.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032869058.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032869059.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032869060.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032869061.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032869062.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032869063.1 | PHOSPHOTRIESTERASE-RELATED |
| XP_032869064.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032869065.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032869066.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032869067.1 | HEME OXYGENASE |
| XP_032869068.1 | HEME OXYGENASE |
| XP_032869069.1 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| XP_032869070.1 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22 |
