The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868921.1 | 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER |
| XP_032868922.1 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
| XP_032868923.1 | TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED |
| XP_032868924.1 | TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED |
| XP_032868925.1 | BCL-2 RELATED |
| XP_032868926.1 | |
| XP_032868927.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032868928.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| XP_032868929.1 | SEPTIN |
| XP_032868930.1 | TITIN |
| XP_032868931.1 | TITIN |
| XP_032868932.1 | TITIN |
| XP_032868933.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| XP_032868934.1 | CASPASE RECRUITMENT DOMAIN FAMILY |
| XP_032868935.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032868936.1 | FRINGE-RELATED |
| XP_032868937.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| XP_032868938.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032868939.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032868940.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032868941.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032868942.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032868943.1 | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) |
| XP_032868944.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| XP_032868945.1 | PROTEIN LIN-7 HOMOLOG |
| XP_032868946.1 | PROTEIN LIN-7 HOMOLOG |
| XP_032868947.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| XP_032868948.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| XP_032868949.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| XP_032868950.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| XP_032868951.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032868952.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032868953.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032868954.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032868955.1 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
| XP_032868956.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| XP_032868957.1 | |
| XP_032868958.1 | |
| XP_032868959.1 | |
| XP_032868960.1 | |
| XP_032868961.1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| XP_032868962.1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| XP_032868963.1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| XP_032868964.1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| XP_032868965.1 | GLYCOPROTEIN HORMONE BETA CHAIN |
| XP_032868966.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| XP_032868967.1 | TETRASPANIN |
| XP_032868968.1 | PROTEIN PHOSPHATASE 2C |
| XP_032868969.1 | PROTEIN PHOSPHATASE 2C |
| XP_032868970.1 | FERRITIN |
