The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g19179 | NICOLIN 1 |
| MBSQW58_g1918 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| MBSQW58_g19180 | PLACENTAL PROTEIN 11-RELATED |
| MBSQW58_g19181 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g19182 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 |
| MBSQW58_g19183 | ANKYRIN REPEAT AND SOCS BOX PROTEIN 17 |
| MBSQW58_g19184 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| MBSQW58_g19185 | |
| MBSQW58_g19186 | ANION EXCHANGE PROTEIN |
| MBSQW58_g19187 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| MBSQW58_g19188 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g19189 | F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA |
| MBSQW58_g1919 | MICROTUBULE-ASSOCIATED PROTEIN |
| MBSQW58_g19190 | CYTOSKELETON-ASSOCIATED PROTEIN 2-LIKE |
| MBSQW58_g19191 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
| MBSQW58_g19192 | - |
| MBSQW58_g19193 | PRE-MRNA CLEAVAGE COMPLEX II |
| MBSQW58_g19194 | RAS-RELATED PROTEIN RAB |
| MBSQW58_g19195 | |
| MBSQW58_g19196 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| MBSQW58_g19197 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
| MBSQW58_g19198 | |
| MBSQW58_g19199 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| MBSQW58_g192 | TUMOR NECROSIS FACTOR RECEPTOR |
| MBSQW58_g1920 | MICROTUBULE-ASSOCIATED PROTEIN |
| MBSQW58_g19200 | |
| MBSQW58_g19201 | RAB GDP-DISSOCIATION INHIBITOR |
| MBSQW58_g19202 | |
| MBSQW58_g19203 | |
| MBSQW58_g19204 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g19205 | |
| MBSQW58_g19206 | PROTEIN CBG11839-RELATED |
| MBSQW58_g19207 | MATRIX PROTEIN, PUTATIVE-RELATED |
| MBSQW58_g19208 | |
| MBSQW58_g19209 | HISTIDINE-RICH GLYCOPROTEIN |
| MBSQW58_g1921 | APOLIPOPROTEIN |
| MBSQW58_g19210 | MATRIX PROTEIN, PUTATIVE-RELATED |
| MBSQW58_g19211 | PDZ DOMAIN-CONTAINING PROTEIN 8 |
| MBSQW58_g19212 | COPPER TRANSPORT PROTEIN ATOX1 |
| MBSQW58_g19213 | REVERSE TRANSCRIPTASE |
| MBSQW58_g19214 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g19215 | |
| MBSQW58_g19216 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| MBSQW58_g19217 | |
| MBSQW58_g19218 | FIBROBLAST GROWTH FACTOR |
| MBSQW58_g19219 | IDURONATE 2-SULFATASE |
| MBSQW58_g1922 | |
| MBSQW58_g19220 | NUDIX HYDROLASE RELATED |
| MBSQW58_g19221 | UNCHARACTERIZED |
| MBSQW58_g19222 |
