The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g19089 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| MBSQW58_g1909 | |
| MBSQW58_g19090 | |
| MBSQW58_g19091 | CYSTEINE PROTEASE ATG4 |
| MBSQW58_g19092 | G PATCH AND KOW-CONTAINING |
| MBSQW58_g19093 | SHIPPO-1-RELATED |
| MBSQW58_g19094 | RAN BINDING PROTEIN |
| MBSQW58_g19095 | RIBULOKINASE |
| MBSQW58_g19096 | |
| MBSQW58_g19097 | |
| MBSQW58_g19098 | REGUCALCIN |
| MBSQW58_g19099 | |
| MBSQW58_g191 | POTASSIUM CHANNEL, SUBFAMILY K |
| MBSQW58_g1910 | - |
| MBSQW58_g19100 | ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE |
| MBSQW58_g19101 | RNA-BINDING PROTEIN RELATED |
| MBSQW58_g19102 | MEIOTIC RECOMBINATION PROTEIN SPO11 |
| MBSQW58_g19103 | 4.1 G PROTEIN |
| MBSQW58_g19104 | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN |
| MBSQW58_g19105 | TETRASPANIN |
| MBSQW58_g19106 | SI:DKEY-19B23.12-RELATED |
| MBSQW58_g19107 | AGAP005329-PA |
| MBSQW58_g19108 | ANKYRIN REPEAT FAMILY PROTEIN |
| MBSQW58_g19109 | GUANINE NUCLEOTIDE EXCHANGE C9ORF72 |
| MBSQW58_g1911 | |
| MBSQW58_g19110 | PBS LYASE HEAT-LIKE PROTEIN |
| MBSQW58_g19111 | 60S RIBOSOMAL PROTEIN L37 |
| MBSQW58_g19112 | F-BOX ONLY PROTEIN 4 |
| MBSQW58_g19113 | |
| MBSQW58_g19114 | TFIIF-ALPHA |
| MBSQW58_g19115 | |
| MBSQW58_g19116 | OXIDASE/PEROXIDASE |
| MBSQW58_g19117 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| MBSQW58_g19118 | STATHMIN |
| MBSQW58_g19119 | RNA 2',3'-CYCLIC PHOSPHODIESTERASE |
| MBSQW58_g1912 | |
| MBSQW58_g19120 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| MBSQW58_g19121 | |
| MBSQW58_g19122 | REPLICATION PROTEIN A-RELATED |
| MBSQW58_g19123 | HISTONE ACETYLTRANSFERASE |
| MBSQW58_g19124 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
| MBSQW58_g19125 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g19126 | ENOYL-COA HYDRATASE-RELATED |
| MBSQW58_g19127 | ELONGIN-C |
| MBSQW58_g19128 | GLYOXALASE FAMILY PROTEIN |
| MBSQW58_g19129 | SUA5 |
| MBSQW58_g1913 | TRANSCRIPTION INTERMEDIARY FACTOR |
| MBSQW58_g19130 | SUA5 |
| MBSQW58_g19131 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| MBSQW58_g19132 | 2-METHYLCITRATE DEHYDRATASE-RELATED |
