About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 198 199 200 201 202 203 204 205 206 207 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG08941.1
RPACG08942.1
RPACG08943.1
RPACG08944.1
RPACG08945.1SPONDIN
RPACG08946.1PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
RPACG08947.1-
RPACG08948.1
RPACG08949.1
RPACG08950.1
RPACG08951.1
RPACG08952.1WD REPEAT DOMAIN-CONTAINING FAMILY
RPACG08953.1
RPACG08954.1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
RPACG08955.1
RPACG08956.1RNA HELICASE
RPACG08957.1-
RPACG08958.1RNA HELICASE
RPACG08959.1-
RPACG08960.1
RPACG08961.1THISBE
RPACG08962.1
RPACG08963.1THISBE
RPACG08964.1
RPACG08965.1
RPACG08966.1
RPACG08967.1
RPACG08968.1
RPACG08969.1
RPACG08970.1SEC63 DOMAIN-CONTAINING
RPACG08970.2
RPACG08971.1
RPACG08972.1
RPACG08973.1
RPACG08974.1TRANSMEMBRANE PROTEIN
RPACG08975.1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
RPACG08975.2
RPACG08976.1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
RPACG08977.1MATING RESPONSE PROTEIN POI2
RPACG08978.1
RPACG08979.1
RPACG08980.1
RPACG08981.1OVOCHYMASE-RELATED
RPACG08981.2
RPACG08982.1
RPACG08982.2
RPACG08983.1
RPACG08983.2
RPACG08984.1
RPACG08985.1DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
TOP