About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 197 198 199 200 201 202 203 204 205 206 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG08897.1ZINC FINGER PROTEIN
RPACG08897.2
RPACG08897.3
RPACG08898.1
RPACG08899.1
RPACG08900.1
RPACG08900.2
RPACG08901.1
RPACG08902.1CYCLINS
RPACG08902.2
RPACG08903.1
RPACG08904.1
RPACG08905.1
RPACG08906.1
RPACG08907.1
RPACG08908.1
RPACG08909.1
RPACG08910.1
RPACG08911.1
RPACG08912.1HISTIDINE TRIAD HIT PROTEIN
RPACG08913.1PINSTRIPE, ISOFORM A
RPACG08914.1PROTEIN CBG04600
RPACG08915.1
RPACG08916.1PROTEIN CBG04600
RPACG08916.2
RPACG08917.1PROTEIN CBG04600
RPACG08918.1
RPACG08919.1
RPACG08920.1GLYCOLIPID TRANSFER PROTEIN-RELATED
RPACG08921.1APOLIPOPROTEIN B48 RECEPTOR
RPACG08922.1BLR2807 PROTEIN
RPACG08923.1
RPACG08924.1SEC14 RELATED PROTEIN
RPACG08925.1SEC14 RELATED PROTEIN
RPACG08926.1SERINE/THREONINE PROTEIN PHOSPHATASE
RPACG08927.1UNCHARACTERIZED
RPACG08928.1ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2
RPACG08929.1NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
RPACG08930.1
RPACG08931.1
RPACG08931.2
RPACG08932.1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
RPACG08933.1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
RPACG08934.1
RPACG08935.1UNCHARACTERIZED
RPACG08936.1
RPACG08937.1CADHERIN DOMAIN-CONTAINING PROTEIN
RPACG08938.1
RPACG08939.1MYB-LIKE PROTEIN V
RPACG08940.1PROTEIN CBG17025
TOP