The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032878071.1 | RHO FAMILY GTPASE |
| XP_032878072.1 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN |
| XP_032878073.1 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN |
| XP_032878074.1 | MYOTROPHIN |
| XP_032878075.1 | MYOTROPHIN |
| XP_032878076.1 | RAI16 PROTEIN-RELATED |
| XP_032878077.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| XP_032878078.1 | PROTEIN PHOSPHATASE |
| XP_032878079.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| XP_032878080.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| XP_032878081.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| XP_032878082.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| XP_032878083.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| XP_032878084.1 | SERINE-THREONINE PROTEIN KINASE |
| XP_032878085.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032878086.1 | PROTEIN PHOSPHATASE |
| XP_032878087.1 | ARFAPTIN-RELATED |
| XP_032878088.1 | ARFAPTIN-RELATED |
| XP_032878089.1 | ARFAPTIN-RELATED |
| XP_032878090.1 | ARFAPTIN-RELATED |
| XP_032878091.1 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
| XP_032878092.1 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B |
| XP_032878093.1 | PROTEIN PHOSPHATASE |
| XP_032878094.1 | CADHERIN-23 |
| XP_032878095.1 | CADHERIN-23 |
| XP_032878096.1 | ARGININE AND GLUTAMATE-RICH PROTEIN 1 |
| XP_032878097.1 | EPHRIN |
| XP_032878098.1 | EPHRIN |
| XP_032878099.1 | DNA LIGASE 4 |
| XP_032878100.1 | PROTEIN PHOSPHATASE |
| XP_032878101.1 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
| XP_032878102.1 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
| XP_032878103.1 | UNCONVENTIONAL MYOSIN-XVI |
| XP_032878104.1 | INSULIN RECEPTOR SUBSTRATE |
| XP_032878105.1 | PROTEIN PHOSPHATASE |
| XP_032878106.1 | MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL |
| XP_032878107.1 | |
| XP_032878108.1 | CONNEXIN |
| XP_032878109.1 | T-CELL SURFACE PROTEIN TACTILE |
| XP_032878110.1 | NECTIN-RELATED |
| XP_032878111.1 | NECTIN-RELATED |
| XP_032878112.1 | LD25575P |
| XP_032878113.1 | LD25575P |
| XP_032878114.1 | LD25575P |
| XP_032878115.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878116.1 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED |
| XP_032878117.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878118.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878119.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878120.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
