The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032877771.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877772.1 | PIKACHURIN-LIKE PROTEIN |
| XP_032877773.1 | CRUMBS FAMILY MEMBER |
| XP_032877774.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877775.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877776.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877777.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877778.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877779.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877780.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032877781.1 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| XP_032877782.1 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| XP_032877783.1 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| XP_032877784.1 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
| XP_032877785.1 | COLLAGEN ALPHA |
| XP_032877786.1 | COLLAGEN ALPHA |
| XP_032877787.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877788.1 | UNCHARACTERIZED |
| XP_032877789.1 | UNCHARACTERIZED |
| XP_032877790.1 | UNCHARACTERIZED |
| XP_032877791.1 | UNCHARACTERIZED |
| XP_032877792.1 | UNCHARACTERIZED |
| XP_032877793.1 | UNCHARACTERIZED |
| XP_032877794.1 | UNCHARACTERIZED |
| XP_032877795.1 | UNCHARACTERIZED |
| XP_032877796.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877797.1 | FI20236P1 |
| XP_032877798.1 | FI20236P1 |
| XP_032877799.1 | SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 4, MITOCHONDRIAL |
| XP_032877800.1 | TRANSCRIPTIONAL REPRESSOR P66-RELATED |
| XP_032877801.1 | NADH-CYTOCHROME B5 REDUCTASE |
| XP_032877802.1 | CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER |
| XP_032877803.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| XP_032877804.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| XP_032877805.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877806.1 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| XP_032877807.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032877808.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032877809.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032877810.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032877811.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032877812.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877813.1 | PROTEIN LIN-28 |
| XP_032877814.1 | 60S RIBOSOMAL PROTEIN L23A |
| XP_032877815.1 | PROLYL ENDOPEPTIDASE |
| XP_032877816.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032877817.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032877818.1 | EPM2A-INTERACTING PROTEIN 1 |
| XP_032877819.1 | AUTOPHAGY PROTEIN 5 |
| XP_032877820.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
