The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032877721.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5 |
| XP_032877722.1 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 |
| XP_032877723.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032877724.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032877725.1 | CALPAIN |
| XP_032877726.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 |
| XP_032877727.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 |
| XP_032877728.1 | AAA DOMAIN-CONTAINING |
| XP_032877729.1 | AAA DOMAIN-CONTAINING |
| XP_032877730.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877731.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032877732.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032877733.1 | E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER |
| XP_032877734.1 | E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER |
| XP_032877735.1 | NUCLEOPORIN NUP43 |
| XP_032877736.1 | PROTEIN CBG16327 |
| XP_032877737.1 | PROTEIN CBG16327 |
| XP_032877738.1 | PROTEIN CBG16327 |
| XP_032877739.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877740.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032877741.1 | SI:CH211-266K2.1 |
| XP_032877742.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| XP_032877743.1 | COLLAGEN ALPHA |
| XP_032877744.1 | SI:CH211-266K2.1 |
| XP_032877745.1 | ENVOPLAKIN |
| XP_032877746.1 | ENVOPLAKIN |
| XP_032877747.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877748.1 | ZINC FINGER PROTEIN |
| XP_032877749.1 | BAG FAMILY MOLECULAR CHAPERONE REGULATOR 2 |
| XP_032877750.1 | BAG FAMILY MOLECULAR CHAPERONE REGULATOR 2 |
| XP_032877751.1 | RAS-RELATED PROTEIN RAB |
| XP_032877752.1 | RAS-RELATED PROTEIN RAB |
| XP_032877753.1 | DNA PRIMASE LARGE SUBUNIT |
| XP_032877754.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877755.1 | RNA-BINDING PROTEIN RELATED |
| XP_032877756.1 | RNA-BINDING PROTEIN RELATED |
| XP_032877757.1 | RNA-BINDING PROTEIN RELATED |
| XP_032877758.1 | RNA-BINDING PROTEIN RELATED |
| XP_032877759.1 | GLUTAMINE SYNTHETASE |
| XP_032877760.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032877761.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032877762.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032877763.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032877764.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032877765.1 | TRANSPOSABLE ELEMENT-RELATED |
| XP_032877766.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032877767.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032877768.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032877769.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032877770.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
