The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032878121.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878122.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878123.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878124.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878125.1 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| XP_032878126.1 | GLYCOSYL TRANSFERASE |
| XP_032878127.1 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
| XP_032878128.1 | PERIOSTIN-RELATED |
| XP_032878129.1 | UBIQUITIN-PROTEIN LIGASE E3C |
| XP_032878130.1 | PERIOSTIN-RELATED |
| XP_032878131.1 | PERIOSTIN-RELATED |
| XP_032878132.1 | PERIOSTIN-RELATED |
| XP_032878133.1 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| XP_032878134.1 | MATRIX PROTEIN, PUTATIVE-RELATED |
| XP_032878135.1 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
| XP_032878136.1 | PROLINE AND SERINE-RICH PROTEIN 1 |
| XP_032878137.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| XP_032878138.1 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| XP_032878139.1 | COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 |
| XP_032878140.1 | COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 |
| XP_032878141.1 | FORKHEAD BOX PROTEIN O |
| XP_032878142.1 | MITOCHONDRIAL RIBOSOMAL PROTEIN S31 |
| XP_032878143.1 | MITOCHONDRIAL RIBOSOMAL PROTEIN S31 |
| XP_032878144.1 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
| XP_032878145.1 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
| XP_032878146.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878147.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878148.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878149.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878150.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878151.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032878152.1 | FIBRINOGEN ALPHA CHAIN |
| XP_032878153.1 | FIBRINOGEN ALPHA CHAIN |
| XP_032878154.1 | VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 |
| XP_032878155.1 | CYTOSKELETON ASSOCIATED PROTEIN 2-RELATED |
| XP_032878156.1 | CYTOSKELETON ASSOCIATED PROTEIN 2-RELATED |
| XP_032878157.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878158.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878159.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878160.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878161.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878162.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878163.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032878164.1 | SERINE/THREONINE-PROTEIN KINASE NEK3 |
| XP_032878165.1 | SERINE/THREONINE-PROTEIN KINASE NEK3 |
| XP_032878166.1 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED |
| XP_032878167.1 | SERINE/THREONINE-PROTEIN KINASE NEK3 |
| XP_032878168.1 | GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE |
| XP_032878169.1 | ATP7, ISOFORM B |
| XP_032878170.1 | ATP7, ISOFORM B |
