About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2645.11931TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold2645.11932
mRNA.BJAM.scaffold2645.11933PROTEIN STAR
mRNA.BJAM.scaffold2645.11934PROTEIN STAR
mRNA.BJAM.scaffold2646.11935
mRNA.BJAM.scaffold2648.11936DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold2648.11937DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold2648.11938DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold2648.11939UNCHARACTERIZED
mRNA.BJAM.scaffold2648.11940UNCHARACTERIZED
mRNA.BJAM.scaffold2648.11941
mRNA.BJAM.scaffold2648.11942DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold2649.1194337S RIBOSOMAL PROTEIN S22
mRNA.BJAM.scaffold265.2023HYDROXYMETHYLGLUTARYL-COA LYASE
mRNA.BJAM.scaffold265.2024CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
mRNA.BJAM.scaffold265.2025
mRNA.BJAM.scaffold2650.11944
mRNA.BJAM.scaffold2650.11945MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold2650.11946
mRNA.BJAM.scaffold2651.11947
mRNA.BJAM.scaffold2652.11948
mRNA.BJAM.scaffold2652.11949
mRNA.BJAM.scaffold2652.11950TRAFFICKING KINESIN-BINDING PROTEIN
mRNA.BJAM.scaffold2652.11951SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold2652.11952
mRNA.BJAM.scaffold2652.11953
mRNA.BJAM.scaffold2653.11954
mRNA.BJAM.scaffold2653.11955PROTON CHANNEL OTOP
mRNA.BJAM.scaffold2653.11956GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
mRNA.BJAM.scaffold2653.11957UNCHARACTERIZED
mRNA.BJAM.scaffold2654.11958
mRNA.BJAM.scaffold2654.11959E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
mRNA.BJAM.scaffold2654.11960BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
mRNA.BJAM.scaffold2655.11961RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
mRNA.BJAM.scaffold2656.11962PROTEIN SIDEKICK
mRNA.BJAM.scaffold2657.11963DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold2658.11964
mRNA.BJAM.scaffold2658.11965POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold2658.11966
mRNA.BJAM.scaffold2658.11967
mRNA.BJAM.scaffold2658.11968ESPIN
mRNA.BJAM.scaffold2658.11969ESPIN
mRNA.BJAM.scaffold2658.11970ESPIN
mRNA.BJAM.scaffold2658.11971
mRNA.BJAM.scaffold2658.11972
mRNA.BJAM.scaffold2659.11973OS01G0750732 PROTEIN
mRNA.BJAM.scaffold2659.11974
mRNA.BJAM.scaffold266.2026ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold266.2027
mRNA.BJAM.scaffold266.2028
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