About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2556.11686
mRNA.BJAM.scaffold2556.11687
mRNA.BJAM.scaffold2556.11688
mRNA.BJAM.scaffold2556.11689
mRNA.BJAM.scaffold2557.11690AHD DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold2557.11691INTERFERON-RELATED DEVELOPMENTAL REGULATOR
mRNA.BJAM.scaffold2557.11692ISOMERASE
mRNA.BJAM.scaffold2557.11693LYSOSOMAL ACID LIPASE-RELATED
mRNA.BJAM.scaffold2557.11694
mRNA.BJAM.scaffold2557.11695
mRNA.BJAM.scaffold2557.11696PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold2557.11697TRYPSIN-RELATED
mRNA.BJAM.scaffold2557.11698CUTICLE PROTEIN
mRNA.BJAM.scaffold2557.11699CUTICLE PROTEIN
mRNA.BJAM.scaffold2558.11700
mRNA.BJAM.scaffold2558.11701
mRNA.BJAM.scaffold2559.11702NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 13
mRNA.BJAM.scaffold2559.11703AMINOTRANSFERASE
mRNA.BJAM.scaffold2559.11704UNCHARACTERIZED
mRNA.BJAM.scaffold2559.11705OUTER SEGMENT 5
mRNA.BJAM.scaffold2559.11706NACHT DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold2559.11707-
mRNA.BJAM.scaffold2559.11708GLE-1-RELATED
mRNA.BJAM.scaffold2559.11709-
mRNA.BJAM.scaffold2559.11710
mRNA.BJAM.scaffold256.1962IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold256.1963
mRNA.BJAM.scaffold256.1964
mRNA.BJAM.scaffold2560.11711POLY ADP-RIBOSE GLYCOHYDROLASE
mRNA.BJAM.scaffold2560.11712
mRNA.BJAM.scaffold2561.11713
mRNA.BJAM.scaffold2561.11714ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4
mRNA.BJAM.scaffold2565.11716
mRNA.BJAM.scaffold2565.11717
mRNA.BJAM.scaffold2565.11718
mRNA.BJAM.scaffold2566.11719
mRNA.BJAM.scaffold2567.11720PROTEIN SIDEKICK
mRNA.BJAM.scaffold2567.11721TITIN
mRNA.BJAM.scaffold2567.11722UBIQUILIN
mRNA.BJAM.scaffold2567.11723CAP BINDING PROTEIN
mRNA.BJAM.scaffold2567.11724AN1-TYPE ZINC FINGER PROTEIN
mRNA.BJAM.scaffold2567.11725
mRNA.BJAM.scaffold2568.11726RAI16 PROTEIN-RELATED
mRNA.BJAM.scaffold2568.11727PROSTATE APOPTOSIS RESPONSE PROTEIN PAR-4
mRNA.BJAM.scaffold2569.11728
mRNA.BJAM.scaffold2569.11729
mRNA.BJAM.scaffold2569.11730
mRNA.BJAM.scaffold2569.11731OS08G0560600 PROTEIN
mRNA.BJAM.scaffold257.1965CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold257.1966CYSTEINE PROTEASE FAMILY C1-RELATED
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