About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2494.11561N-ACETYLGALACTOSAMINYLTRANSFERASE
mRNA.BJAM.scaffold2494.11562COILED-COIL DOMAIN-CONTAINING PROTEIN 30
mRNA.BJAM.scaffold2494.11563DEFECTIVE SPERMATOGENESIS PROTEIN 39
mRNA.BJAM.scaffold2494.11564PHOSPHOACETYLGLUCOSAMINE MUTASE
mRNA.BJAM.scaffold2494.11565CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8
mRNA.BJAM.scaffold2494.11566CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8
mRNA.BJAM.scaffold2496.11567
mRNA.BJAM.scaffold2496.11568PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
mRNA.BJAM.scaffold2496.11569
mRNA.BJAM.scaffold2496.11570
mRNA.BJAM.scaffold2496.11571NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold2496.11572
mRNA.BJAM.scaffold2497.11573
mRNA.BJAM.scaffold2497.11574CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2498.11575
mRNA.BJAM.scaffold2498.11576
mRNA.BJAM.scaffold2498.11577POLY [ADP-RIBOSE] POLYMERASE
mRNA.BJAM.scaffold2498.11578POLY [ADP-RIBOSE] POLYMERASE
mRNA.BJAM.scaffold2498.11579IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold2499.11580
mRNA.BJAM.scaffold25.173
mRNA.BJAM.scaffold25.174
mRNA.BJAM.scaffold25.175
mRNA.BJAM.scaffold250.1936NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
mRNA.BJAM.scaffold250.1937PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
mRNA.BJAM.scaffold250.1938AMINO ACID TRANSPORTER
mRNA.BJAM.scaffold250.1939
mRNA.BJAM.scaffold250.1940
mRNA.BJAM.scaffold250.1941ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold250.1942ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold250.1943CARBOXYLESTERASE
mRNA.BJAM.scaffold2500.11581-
mRNA.BJAM.scaffold2501.11582
mRNA.BJAM.scaffold2504.11583MEMBRANE PROTEIN CH1 RELATED
mRNA.BJAM.scaffold2504.11584MEMBRANE PROTEIN CH1 RELATED
mRNA.BJAM.scaffold2505.11585CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR
mRNA.BJAM.scaffold2505.11586TETRATRICOPEPTIDE REPEAT PROTEIN
mRNA.BJAM.scaffold2506.11587BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold2507.11588MICROSOMAL DIPEPTIDASE
mRNA.BJAM.scaffold2507.11589
mRNA.BJAM.scaffold2508.11590
mRNA.BJAM.scaffold2508.11591NADH-UBIQUINONE OXIDOREDUCTASE SGDH SUBUNIT
mRNA.BJAM.scaffold2509.11592PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
mRNA.BJAM.scaffold2509.11593
mRNA.BJAM.scaffold2509.11594
mRNA.BJAM.scaffold2509.11595PROTEIN STAR
mRNA.BJAM.scaffold251.1944
mRNA.BJAM.scaffold2510.11596SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT
mRNA.BJAM.scaffold2511.11599
mRNA.BJAM.scaffold2511.11600
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