About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2674.12005ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold2674.12006
mRNA.BJAM.scaffold2674.12007ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold2674.12008ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold2674.12009ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold2674.12010
mRNA.BJAM.scaffold2674.12011ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold2675.12012
mRNA.BJAM.scaffold2676.12013
mRNA.BJAM.scaffold2676.12014RIKEN CDNA D130052B06 GENE
mRNA.BJAM.scaffold2676.12015
mRNA.BJAM.scaffold2676.12018
mRNA.BJAM.scaffold2676.12019
mRNA.BJAM.scaffold2677.12020
mRNA.BJAM.scaffold2677.12021GABA-B RECEPTOR
mRNA.BJAM.scaffold2677.12022GABA-B RECEPTOR
mRNA.BJAM.scaffold2677.12023
mRNA.BJAM.scaffold2679.12026TRYPSIN-RELATED
mRNA.BJAM.scaffold268.2049CHLORIDE CHANNEL PROTEIN 2
mRNA.BJAM.scaffold268.2050CHLORIDE CHANNEL PROTEIN 2
mRNA.BJAM.scaffold268.2051SH2-SH3 ADAPTOR PROTEIN-RELATED
mRNA.BJAM.scaffold268.2052EXOCYST COMPLEX COMPONENT SEC5
mRNA.BJAM.scaffold268.2053
mRNA.BJAM.scaffold268.2054EXOCYST COMPLEX COMPONENT SEC5
mRNA.BJAM.scaffold268.2055UPF0472 PROTEIN C16ORF72
mRNA.BJAM.scaffold268.2056
mRNA.BJAM.scaffold268.2057
mRNA.BJAM.scaffold268.2058DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
mRNA.BJAM.scaffold268.2059MISEXPRESSION SUPPRESSOR OF RAS 6
mRNA.BJAM.scaffold268.2060
mRNA.BJAM.scaffold268.2061ALKALINE CERAMIDASE
mRNA.BJAM.scaffold268.2062ORGANIC ANION TRANSPORTER
mRNA.BJAM.scaffold268.2063
mRNA.BJAM.scaffold268.2064PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE
mRNA.BJAM.scaffold268.2065
mRNA.BJAM.scaffold268.2066
mRNA.BJAM.scaffold268.2067BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold268.2068
mRNA.BJAM.scaffold268.2069CYCLIN-DEPENDENT KINASE INHIBITOR 1
mRNA.BJAM.scaffold2681.120276-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
mRNA.BJAM.scaffold2681.12028
mRNA.BJAM.scaffold2681.12029
mRNA.BJAM.scaffold2681.12030UBIQUITIN LIGASE E3 ALPHA-RELATED
mRNA.BJAM.scaffold2681.12031ATP SYNTHASE
mRNA.BJAM.scaffold2684.12032PHOSPHOTRIESTERASE-RELATED
mRNA.BJAM.scaffold2684.12033
mRNA.BJAM.scaffold2684.12034TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold2684.12035TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold2684.12036TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold2684.12037
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