Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00088510 | |
| SKAU_T00088520 | |
| SKAU_T00088530 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00088540 | SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN |
| SKAU_T00088550 | |
| SKAU_T00088560 | WD REPEAT DOMAIN 9 |
| SKAU_T00088570 | PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED |
| SKAU_T00088580 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| SKAU_T00088590 | SACSIN |
| SKAU_T00088600 | SARCOGLYCAN |
| SKAU_T00088610 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT |
| SKAU_T00088620 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| SKAU_T00088630 | |
| SKAU_T00088640 | NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1 |
| SKAU_T00088650 | SIALATE O-ACETYLESTERASE |
| SKAU_T00088660 | SIALATE O-ACETYLESTERASE |
| SKAU_T00088670 | TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 |
| SKAU_T00088680 | |
| SKAU_T00088690 | |
| SKAU_T00088700 | |
| SKAU_T00088710 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
| SKAU_T00088720 | |
| SKAU_T00088730 | BETA-GALACTOSIDASE RELATED |
| SKAU_T00088740 | BETA-GALACTOSIDASE RELATED |
| SKAU_T00088750 | PROTEIN FAM118B |
| SKAU_T00088760 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| SKAU_T00088770 | TIRAP |
| SKAU_T00088780 | SIALYLTRANSFERASE |
| SKAU_T00088790 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00088800 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00088810 | ETS |
| SKAU_T00088820 | |
| SKAU_T00088830 | |
| SKAU_T00088840 | |
| SKAU_T00088850 | |
| SKAU_T00088860 | |
| SKAU_T00088870 | ETS |
| SKAU_T00088880 | |
| SKAU_T00088890 | |
| SKAU_T00088900 | |
| SKAU_T00088910 | |
| SKAU_T00088920 | |
| SKAU_T00088930 | |
| SKAU_T00088940 | |
| SKAU_T00088950 | |
| SKAU_T00088960 | |
| SKAU_T00088970 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| SKAU_T00088980 | WD REPEAT-CONTAINING PROTEIN 97 |
| SKAU_T00088990 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00089000 | ALANINE AMINOTRANSFERASE |
