Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00085510 | BEIGE/BEACH-RELATED |
| SKAU_T00085520 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| SKAU_T00085530 | |
| SKAU_T00085540 | |
| SKAU_T00085550 | NXPE FAMILY MEMBER |
| SKAU_T00085560 | NXPE FAMILY MEMBER |
| SKAU_T00085570 | UNCHARACTERIZED |
| SKAU_T00085580 | NXPE FAMILY MEMBER |
| SKAU_T00085590 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00085600 | TRANSCRIPTION FACTOR-LIKE 5 PROTEIN |
| SKAU_T00085610 | INOSITOL 5-PHOSPHATASE |
| SKAU_T00085620 | ZGC:174356 |
| SKAU_T00085630 | |
| SKAU_T00085640 | |
| SKAU_T00085650 | |
| SKAU_T00085660 | |
| SKAU_T00085670 | |
| SKAU_T00085680 | CADHERIN-87A |
| SKAU_T00085690 | |
| SKAU_T00085700 | CADHERIN-23 |
| SKAU_T00085710 | |
| SKAU_T00085720 | |
| SKAU_T00085730 | ARFAPTIN-RELATED |
| SKAU_T00085740 | INVERTED FORMIN-2 |
| SKAU_T00085750 | |
| SKAU_T00085760 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| SKAU_T00085770 | MACROGLOBULIN / COMPLEMENT |
| SKAU_T00085780 | MATRIX PROTEIN, PUTATIVE-RELATED |
| SKAU_T00085790 | |
| SKAU_T00085800 | |
| SKAU_T00085810 | NNMT/PNMT/TEMT FAMILY MEMBER |
| SKAU_T00085820 | NNMT/PNMT/TEMT FAMILY MEMBER |
| SKAU_T00085830 | |
| SKAU_T00085840 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| SKAU_T00085850 | PERIOSTIN-RELATED |
| SKAU_T00085860 | |
| SKAU_T00085870 | TRANSCRIPTION FACTOR SPT20 HOMOLOG |
| SKAU_T00085880 | SPARTIN |
| SKAU_T00085890 | NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 |
| SKAU_T00085900 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00085910 | RNA PROCESSING PROTEIN LD23810P |
| SKAU_T00085920 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| SKAU_T00085930 | |
| SKAU_T00085940 | |
| SKAU_T00085950 | CLAUDIN |
| SKAU_T00085960 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00085970 | |
| SKAU_T00085980 | AGAP004733-PA |
| SKAU_T00085990 | CHAPERONIN |
| SKAU_T00086000 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
