Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00083510 | ZINC FINGER PROTEIN |
| SKAU_T00083520 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| SKAU_T00083530 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| SKAU_T00083540 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00083550 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00083560 | |
| SKAU_T00083570 | ETS |
| SKAU_T00083580 | ETS |
| SKAU_T00083590 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| SKAU_T00083600 | WNT RELATED |
| SKAU_T00083610 | DIACYLGLYCEROL O-ACYLTRANSFERASE |
| SKAU_T00083620 | STOP PROTEIN |
| SKAU_T00083630 | GLYCOPROTEIN 38 |
| SKAU_T00083640 | HISTONE H4 TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00083650 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00083660 | COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR-RELATED |
| SKAU_T00083670 | FIBROSIN FAMILY MEMBER |
| SKAU_T00083680 | |
| SKAU_T00083690 | |
| SKAU_T00083700 | |
| SKAU_T00083710 | |
| SKAU_T00083720 | |
| SKAU_T00083730 | |
| SKAU_T00083740 | |
| SKAU_T00083750 | |
| SKAU_T00083760 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| SKAU_T00083770 | |
| SKAU_T00083780 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00083790 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
| SKAU_T00083800 | NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR |
| SKAU_T00083810 | |
| SKAU_T00083820 | INTEGRIN ALPHA |
| SKAU_T00083830 | P2X PURINOCEPTOR |
| SKAU_T00083840 | UNCHARACTERIZED |
| SKAU_T00083850 | |
| SKAU_T00083860 | FLOTILLIN-RELATED |
| SKAU_T00083870 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
| SKAU_T00083880 | VITAMIN K EPOXIDE REDUCTASE COMPLEX, SUBUNIT 1 |
| SKAU_T00083890 | CARBONIC ANHYDRASE |
| SKAU_T00083900 | MYOTUBULARIN-RELATED |
| SKAU_T00083910 | RING ZINC FINGER |
| SKAU_T00083920 | RIM BINDING PROTEIN-RELATED |
| SKAU_T00083930 | SRCR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00083940 | 14-3-3 PROTEIN |
| SKAU_T00083950 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
| SKAU_T00083960 | SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED |
| SKAU_T00083970 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00083980 | |
| SKAU_T00083990 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00084000 | SPINSTER |
