About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2230.10766HUEL-CATION TRANSPORTER
mRNA.BJAM.scaffold2230.10767
mRNA.BJAM.scaffold2230.10768
mRNA.BJAM.scaffold2230.10769
mRNA.BJAM.scaffold2230.10770
mRNA.BJAM.scaffold2230.10771POLYCYSTIN FAMILY MEMBER
mRNA.BJAM.scaffold2230.10772
mRNA.BJAM.scaffold2230.10773POLYCYSTIN FAMILY MEMBER
mRNA.BJAM.scaffold2230.10774AAA-FAMILY ATPASE
mRNA.BJAM.scaffold2230.10775
mRNA.BJAM.scaffold2230.10776ANOCTAMIN
mRNA.BJAM.scaffold2230.10777ANOCTAMIN
mRNA.BJAM.scaffold2231.10778
mRNA.BJAM.scaffold2232.10779ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold2232.10780
mRNA.BJAM.scaffold2232.10781
mRNA.BJAM.scaffold2232.10782AD-003 - RELATED
mRNA.BJAM.scaffold2232.10783AUTOSOMAL HIGHLY CONSERVED PROTEIN
mRNA.BJAM.scaffold2232.10784ATP-DEPENDENT RNA HELICASE RHLE-RELATED
mRNA.BJAM.scaffold2232.10785PROTEIN SNAKESKIN
mRNA.BJAM.scaffold2232.10786NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold2233.10787ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT
mRNA.BJAM.scaffold2236.10788AUGMIN SUBUNIT 4 FAMILY MEMBER
mRNA.BJAM.scaffold2236.10789
mRNA.BJAM.scaffold2236.10790
mRNA.BJAM.scaffold2236.10791BASIGIN RELATED
mRNA.BJAM.scaffold2236.10792
mRNA.BJAM.scaffold2237.10793ROUND SPERMATID BASIC PROTEIN 1
mRNA.BJAM.scaffold2237.10794ROUND SPERMATID BASIC PROTEIN 1
mRNA.BJAM.scaffold2237.10795DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS
mRNA.BJAM.scaffold2237.10796NUDIX HYDROLASE, NUDC SUBFAMILY
mRNA.BJAM.scaffold2237.10797PHOSPHOENOLPYRUVATE CARBOXYKINASE
mRNA.BJAM.scaffold2237.10798
mRNA.BJAM.scaffold2237.10799BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
mRNA.BJAM.scaffold2237.10800GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
mRNA.BJAM.scaffold2237.10801GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
mRNA.BJAM.scaffold2237.10802
mRNA.BJAM.scaffold2238.10803CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2238.10804
mRNA.BJAM.scaffold2239.10805
mRNA.BJAM.scaffold2239.10806BESTROPHIN
mRNA.BJAM.scaffold2239.10807POLY [ADP-RIBOSE] POLYMERASE
mRNA.BJAM.scaffold2239.10808BESTROPHIN
mRNA.BJAM.scaffold2239.10809BESTROPHIN
mRNA.BJAM.scaffold2239.10810POLY [ADP-RIBOSE] POLYMERASE
mRNA.BJAM.scaffold224.17832-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL
mRNA.BJAM.scaffold224.1784CRAMPED PROTEIN
mRNA.BJAM.scaffold224.1785
mRNA.BJAM.scaffold224.1786
mRNA.BJAM.scaffold224.1787
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